RNA–Protein interactions for RNA: ENST00000563140.1

AL133279.3-201, humanhuman

BASIC

Gene AL133279.3, Length 2,352 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL133279.3-201ENST00000563140 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
AL133279.3-201ENST00000563140 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
AL133279.3-201ENST00000563140 ABCC9O60706 1549 aa16.04■□□□□ 0.16
AL133279.3-201ENST00000563140 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
AL133279.3-201ENST00000563140 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
AL133279.3-201ENST00000563140 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
AL133279.3-201ENST00000563140 MYO15BQ96JP2 1530 aa15.66■□□□□ 0.1
AL133279.3-201ENST00000563140 NACADO15069 1562 aa15.65■□□□□ 0.1
AL133279.3-201ENST00000563140 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
AL133279.3-201ENST00000563140 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
AL133279.3-201ENST00000563140 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
AL133279.3-201ENST00000563140 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
AL133279.3-201ENST00000563140 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
AL133279.3-201ENST00000563140 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
AL133279.3-201ENST00000563140 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.04
AL133279.3-201ENST00000563140 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
AL133279.3-201ENST00000563140 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
AL133279.3-201ENST00000563140 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
AL133279.3-201ENST00000563140 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
AL133279.3-201ENST00000563140 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
AL133279.3-201ENST00000563140 WIZO95785 1651 aa14.61□□□□□ -0.07
AL133279.3-201ENST00000563140 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
AL133279.3-201ENST00000563140 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
AL133279.3-201ENST00000563140 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
AL133279.3-201ENST00000563140 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
AL133279.3-201ENST00000563140 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
AL133279.3-201ENST00000563140 NCAPD3P42695 1498 aa14.43□□□□□ -0.1
AL133279.3-201ENST00000563140 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
AL133279.3-201ENST00000563140 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
AL133279.3-201ENST00000563140 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
AL133279.3-201ENST00000563140 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
AL133279.3-201ENST00000563140 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
AL133279.3-201ENST00000563140 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
AL133279.3-201ENST00000563140 CFTRP13569 1480 aa14.04□□□□□ -0.16
AL133279.3-201ENST00000563140 NESP48681 1621 aa14.03□□□□□ -0.16
AL133279.3-201ENST00000563140 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
AL133279.3-201ENST00000563140 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
AL133279.3-201ENST00000563140 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
AL133279.3-201ENST00000563140 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
AL133279.3-201ENST00000563140 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
AL133279.3-201ENST00000563140 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
AL133279.3-201ENST00000563140 CHIC1Q5VXU3 224 aa13.82□□□□□ -0.2
AL133279.3-201ENST00000563140 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
AL133279.3-201ENST00000563140 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
AL133279.3-201ENST00000563140 WRNQ14191 1432 aaPredicted RBP eCLIP13.79□□□□□ -0.2
AL133279.3-201ENST00000563140 CUX1P39880 1505 aa13.78□□□□□ -0.2
AL133279.3-201ENST00000563140 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.21
AL133279.3-201ENST00000563140 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
AL133279.3-201ENST00000563140 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
AL133279.3-201ENST00000563140 URB2Q14146 1524 aaKnown RBP13.75□□□□□ -0.21
AL133279.3-201ENST00000563140 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
AL133279.3-201ENST00000563140 THOC2Q8NI27 1593 aaKnown RBP13.73□□□□□ -0.21
AL133279.3-201ENST00000563140 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
AL133279.3-201ENST00000563140 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
AL133279.3-201ENST00000563140 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
AL133279.3-201ENST00000563140 WDR62O43379 1518 aa13.69□□□□□ -0.22
AL133279.3-201ENST00000563140 FGD5Q6ZNL6 1462 aa13.65□□□□□ -0.22
AL133279.3-201ENST00000563140 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
AL133279.3-201ENST00000563140 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
AL133279.3-201ENST00000563140 RAD54L2Q9Y4B4 1467 aa13.58□□□□□ -0.24
AL133279.3-201ENST00000563140 CUX2O14529 1486 aa13.57□□□□□ -0.24
AL133279.3-201ENST00000563140 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
AL133279.3-201ENST00000563140 SOGA1O94964 1423 aa13.55□□□□□ -0.24
AL133279.3-201ENST00000563140 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
AL133279.3-201ENST00000563140 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.24
AL133279.3-201ENST00000563140 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
AL133279.3-201ENST00000563140 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
AL133279.3-201ENST00000563140 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
AL133279.3-201ENST00000563140 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
AL133279.3-201ENST00000563140 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
AL133279.3-201ENST00000563140 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
AL133279.3-201ENST00000563140 EEA1Q15075 1411 aa13.43□□□□□ -0.26
AL133279.3-201ENST00000563140 EIF4G3O43432 1585 aaKnown RBP13.43□□□□□ -0.26
AL133279.3-201ENST00000563140 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
AL133279.3-201ENST00000563140 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
AL133279.3-201ENST00000563140 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
AL133279.3-201ENST00000563140 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
AL133279.3-201ENST00000563140 IGF1RP08069 1367 aa13.37□□□□□ -0.27
AL133279.3-201ENST00000563140 ERICH3Q5RHP9 1530 aa13.36□□□□□ -0.27
AL133279.3-201ENST00000563140 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
AL133279.3-201ENST00000563140 CUL7Q14999 1698 aa13.34□□□□□ -0.27
AL133279.3-201ENST00000563140 KIF21BO75037 1637 aa13.34□□□□□ -0.27
AL133279.3-201ENST00000563140 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
AL133279.3-201ENST00000563140 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
AL133279.3-201ENST00000563140 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
AL133279.3-201ENST00000563140 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
AL133279.3-201ENST00000563140 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
AL133279.3-201ENST00000563140 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
AL133279.3-201ENST00000563140 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
AL133279.3-201ENST00000563140 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
AL133279.3-201ENST00000563140 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
AL133279.3-201ENST00000563140 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
AL133279.3-201ENST00000563140 CHD1O14646 1710 aa13.23□□□□□ -0.29
AL133279.3-201ENST00000563140 SYNJ2O15056 1496 aa13.21□□□□□ -0.29
AL133279.3-201ENST00000563140 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
AL133279.3-201ENST00000563140 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
AL133279.3-201ENST00000563140 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
AL133279.3-201ENST00000563140 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
AL133279.3-201ENST00000563140 TNIKQ9UKE5 1360 aa13.15□□□□□ -0.3
AL133279.3-201ENST00000563140 CHMP7Q8WUX9 453 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms