RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
CYLD-204ENST00000562884 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
CYLD-204ENST00000562884 ABCC9O60706 1549 aa18.85■□□□□ 0.61
CYLD-204ENST00000562884 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
CYLD-204ENST00000562884 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
CYLD-204ENST00000562884 NACADO15069 1562 aa18.16■□□□□ 0.5
CYLD-204ENST00000562884 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.48
CYLD-204ENST00000562884 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
CYLD-204ENST00000562884 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
CYLD-204ENST00000562884 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
CYLD-204ENST00000562884 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
CYLD-204ENST00000562884 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
CYLD-204ENST00000562884 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
CYLD-204ENST00000562884 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
CYLD-204ENST00000562884 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
CYLD-204ENST00000562884 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
CYLD-204ENST00000562884 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
CYLD-204ENST00000562884 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
CYLD-204ENST00000562884 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
CYLD-204ENST00000562884 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CYLD-204ENST00000562884 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
CYLD-204ENST00000562884 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
CYLD-204ENST00000562884 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
CYLD-204ENST00000562884 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
CYLD-204ENST00000562884 ATAD2BQ9ULI0 1458 aa16.69■□□□□ 0.26
CYLD-204ENST00000562884 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
CYLD-204ENST00000562884 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
CYLD-204ENST00000562884 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
CYLD-204ENST00000562884 BAZ1BQ9UIG0 1483 aaKnown RBP16.58■□□□□ 0.24
CYLD-204ENST00000562884 WIZO95785 1651 aa16.44■□□□□ 0.22
CYLD-204ENST00000562884 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
CYLD-204ENST00000562884 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
CYLD-204ENST00000562884 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
CYLD-204ENST00000562884 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
CYLD-204ENST00000562884 NESP48681 1621 aa16.27■□□□□ 0.2
CYLD-204ENST00000562884 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
CYLD-204ENST00000562884 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
CYLD-204ENST00000562884 CUX2O14529 1486 aa16.19■□□□□ 0.18
CYLD-204ENST00000562884 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
CYLD-204ENST00000562884 CFTRP13569 1480 aa16.11■□□□□ 0.17
CYLD-204ENST00000562884 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
CYLD-204ENST00000562884 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
CYLD-204ENST00000562884 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
CYLD-204ENST00000562884 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
CYLD-204ENST00000562884 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
CYLD-204ENST00000562884 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
CYLD-204ENST00000562884 WDR62O43379 1518 aa15.96■□□□□ 0.15
CYLD-204ENST00000562884 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
CYLD-204ENST00000562884 ABCC8Q09428 1581 aa15.85■□□□□ 0.13
CYLD-204ENST00000562884 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
CYLD-204ENST00000562884 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
CYLD-204ENST00000562884 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
CYLD-204ENST00000562884 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
CYLD-204ENST00000562884 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
CYLD-204ENST00000562884 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
CYLD-204ENST00000562884 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CYLD-204ENST00000562884 TARBP1Q13395 1621 aaKnown RBP15.6■□□□□ 0.09
CYLD-204ENST00000562884 CUX1P39880 1505 aa15.58■□□□□ 0.09
CYLD-204ENST00000562884 SOGA1O94964 1423 aa15.58■□□□□ 0.08
CYLD-204ENST00000562884 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
CYLD-204ENST00000562884 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
CYLD-204ENST00000562884 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
CYLD-204ENST00000562884 EIF4G3O43432 1585 aaKnown RBP15.54■□□□□ 0.08
CYLD-204ENST00000562884 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.08
CYLD-204ENST00000562884 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
CYLD-204ENST00000562884 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
CYLD-204ENST00000562884 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
CYLD-204ENST00000562884 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
CYLD-204ENST00000562884 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
CYLD-204ENST00000562884 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
CYLD-204ENST00000562884 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
CYLD-204ENST00000562884 ABCA10Q8WWZ4 1543 aa15.44■□□□□ 0.06
CYLD-204ENST00000562884 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
CYLD-204ENST00000562884 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
CYLD-204ENST00000562884 CHD1O14646 1710 aa15.4■□□□□ 0.06
CYLD-204ENST00000562884 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
CYLD-204ENST00000562884 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
CYLD-204ENST00000562884 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
CYLD-204ENST00000562884 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
CYLD-204ENST00000562884 FBLN2P98095 1184 aa15.36■□□□□ 0.05
CYLD-204ENST00000562884 SNAPC4Q5SXM2 1469 aa15.35■□□□□ 0.05
CYLD-204ENST00000562884 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
CYLD-204ENST00000562884 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
CYLD-204ENST00000562884 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.04
CYLD-204ENST00000562884 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
CYLD-204ENST00000562884 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
CYLD-204ENST00000562884 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
CYLD-204ENST00000562884 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
CYLD-204ENST00000562884 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
CYLD-204ENST00000562884 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
CYLD-204ENST00000562884 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
CYLD-204ENST00000562884 CLASP1Q7Z460 1538 aa15.2■□□□□ 0.02
CYLD-204ENST00000562884 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
CYLD-204ENST00000562884 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
CYLD-204ENST00000562884 CUL7Q14999 1698 aa15.14■□□□□ 0.01
CYLD-204ENST00000562884 NUP160Q12769 1436 aa15.13■□□□□ 0.01
CYLD-204ENST00000562884 IGF1RP08069 1367 aa15.12■□□□□ 0.01
CYLD-204ENST00000562884 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
CYLD-204ENST00000562884 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
CYLD-204ENST00000562884 ARAP1Q96P48 1450 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms