RNA–Protein interactions for RNA: ENST00000562807.5

ERVK13-1-201, Transcript of endogenous retrovirus group K13 member 1, humanhuman

TSL 4

Gene ERVK13-1, Length 594 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK13-1-201ENST00000562807 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
ERVK13-1-201ENST00000562807 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
ERVK13-1-201ENST00000562807 ABCC9O60706 1549 aa27.61■■■□□ 2.01
ERVK13-1-201ENST00000562807 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
ERVK13-1-201ENST00000562807 NACADO15069 1562 aa26.33■■□□□ 1.81
ERVK13-1-201ENST00000562807 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
ERVK13-1-201ENST00000562807 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
ERVK13-1-201ENST00000562807 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
ERVK13-1-201ENST00000562807 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
ERVK13-1-201ENST00000562807 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
ERVK13-1-201ENST00000562807 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
ERVK13-1-201ENST00000562807 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
ERVK13-1-201ENST00000562807 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
ERVK13-1-201ENST00000562807 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
ERVK13-1-201ENST00000562807 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
ERVK13-1-201ENST00000562807 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
ERVK13-1-201ENST00000562807 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
ERVK13-1-201ENST00000562807 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
ERVK13-1-201ENST00000562807 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
ERVK13-1-201ENST00000562807 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
ERVK13-1-201ENST00000562807 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
ERVK13-1-201ENST00000562807 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
ERVK13-1-201ENST00000562807 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
ERVK13-1-201ENST00000562807 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
ERVK13-1-201ENST00000562807 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
ERVK13-1-201ENST00000562807 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
ERVK13-1-201ENST00000562807 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
ERVK13-1-201ENST00000562807 CUX2O14529 1486 aa23.96■■□□□ 1.43
ERVK13-1-201ENST00000562807 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
ERVK13-1-201ENST00000562807 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
ERVK13-1-201ENST00000562807 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
ERVK13-1-201ENST00000562807 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
ERVK13-1-201ENST00000562807 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
ERVK13-1-201ENST00000562807 NESP48681 1621 aa23.66■■□□□ 1.38
ERVK13-1-201ENST00000562807 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
ERVK13-1-201ENST00000562807 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
ERVK13-1-201ENST00000562807 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
ERVK13-1-201ENST00000562807 WIZO95785 1651 aa23.45■■□□□ 1.34
ERVK13-1-201ENST00000562807 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
ERVK13-1-201ENST00000562807 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
ERVK13-1-201ENST00000562807 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
ERVK13-1-201ENST00000562807 CEP164Q9UPV0 1460 aa23.29■■□□□ 1.32
ERVK13-1-201ENST00000562807 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
ERVK13-1-201ENST00000562807 WDR62O43379 1518 aa23.27■■□□□ 1.32
ERVK13-1-201ENST00000562807 CFTRP13569 1480 aa23.25■■□□□ 1.31
ERVK13-1-201ENST00000562807 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
ERVK13-1-201ENST00000562807 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
ERVK13-1-201ENST00000562807 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
ERVK13-1-201ENST00000562807 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
ERVK13-1-201ENST00000562807 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
ERVK13-1-201ENST00000562807 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
ERVK13-1-201ENST00000562807 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
ERVK13-1-201ENST00000562807 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
ERVK13-1-201ENST00000562807 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
ERVK13-1-201ENST00000562807 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
ERVK13-1-201ENST00000562807 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
ERVK13-1-201ENST00000562807 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
ERVK13-1-201ENST00000562807 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
ERVK13-1-201ENST00000562807 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
ERVK13-1-201ENST00000562807 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
ERVK13-1-201ENST00000562807 SOGA1O94964 1423 aa22.47■■□□□ 1.19
ERVK13-1-201ENST00000562807 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.19
ERVK13-1-201ENST00000562807 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
ERVK13-1-201ENST00000562807 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
ERVK13-1-201ENST00000562807 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
ERVK13-1-201ENST00000562807 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
ERVK13-1-201ENST00000562807 FBLN2P98095 1184 aa22.38■■□□□ 1.17
ERVK13-1-201ENST00000562807 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
ERVK13-1-201ENST00000562807 CHD1O14646 1710 aa22.37■■□□□ 1.17
ERVK13-1-201ENST00000562807 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
ERVK13-1-201ENST00000562807 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
ERVK13-1-201ENST00000562807 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
ERVK13-1-201ENST00000562807 CUX1P39880 1505 aa22.32■■□□□ 1.16
ERVK13-1-201ENST00000562807 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
ERVK13-1-201ENST00000562807 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
ERVK13-1-201ENST00000562807 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
ERVK13-1-201ENST00000562807 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
ERVK13-1-201ENST00000562807 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
ERVK13-1-201ENST00000562807 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
ERVK13-1-201ENST00000562807 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
ERVK13-1-201ENST00000562807 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
ERVK13-1-201ENST00000562807 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
ERVK13-1-201ENST00000562807 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
ERVK13-1-201ENST00000562807 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
ERVK13-1-201ENST00000562807 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
ERVK13-1-201ENST00000562807 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
ERVK13-1-201ENST00000562807 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
ERVK13-1-201ENST00000562807 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
ERVK13-1-201ENST00000562807 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
ERVK13-1-201ENST00000562807 TRHP20396 242 aaPredicted RBP22.02■■□□□ 1.12
ERVK13-1-201ENST00000562807 GRIN2AQ12879 1464 aa21.97■■□□□ 1.11
ERVK13-1-201ENST00000562807 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
ERVK13-1-201ENST00000562807 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
ERVK13-1-201ENST00000562807 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
ERVK13-1-201ENST00000562807 NUP160Q12769 1436 aa21.89■■□□□ 1.1
ERVK13-1-201ENST00000562807 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
ERVK13-1-201ENST00000562807 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
ERVK13-1-201ENST00000562807 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
ERVK13-1-201ENST00000562807 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
ERVK13-1-201ENST00000562807 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms