RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
PKD1-225ENST00000562297 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
PKD1-225ENST00000562297 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
PKD1-225ENST00000562297 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
PKD1-225ENST00000562297 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
PKD1-225ENST00000562297 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
PKD1-225ENST00000562297 ABCC9O60706 1549 aa30.43■■■□□ 2.46
PKD1-225ENST00000562297 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
PKD1-225ENST00000562297 NACADO15069 1562 aa30.09■■■□□ 2.41
PKD1-225ENST00000562297 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
PKD1-225ENST00000562297 RB1CC1Q8TDY2 1594 aa29.78■■■□□ 2.36
PKD1-225ENST00000562297 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
PKD1-225ENST00000562297 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
PKD1-225ENST00000562297 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
PKD1-225ENST00000562297 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
PKD1-225ENST00000562297 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
PKD1-225ENST00000562297 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
PKD1-225ENST00000562297 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
PKD1-225ENST00000562297 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
PKD1-225ENST00000562297 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
PKD1-225ENST00000562297 WIZO95785 1651 aa28.6■■■□□ 2.17
PKD1-225ENST00000562297 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
PKD1-225ENST00000562297 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
PKD1-225ENST00000562297 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
PKD1-225ENST00000562297 ATAD2BQ9ULI0 1458 aa28.07■■■□□ 2.08
PKD1-225ENST00000562297 SMARCA2P51531 1590 aa28.04■■■□□ 2.08
PKD1-225ENST00000562297 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
PKD1-225ENST00000562297 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
PKD1-225ENST00000562297 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
PKD1-225ENST00000562297 NCAPD3P42695 1498 aa27.78■■■□□ 2.04
PKD1-225ENST00000562297 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
PKD1-225ENST00000562297 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
PKD1-225ENST00000562297 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
PKD1-225ENST00000562297 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
PKD1-225ENST00000562297 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
PKD1-225ENST00000562297 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
PKD1-225ENST00000562297 CFTRP13569 1480 aa27.23■■□□□ 1.95
PKD1-225ENST00000562297 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
PKD1-225ENST00000562297 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
PKD1-225ENST00000562297 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.93
PKD1-225ENST00000562297 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
PKD1-225ENST00000562297 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
PKD1-225ENST00000562297 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
PKD1-225ENST00000562297 SOGA1O94964 1423 aa27■■□□□ 1.91
PKD1-225ENST00000562297 CUX1P39880 1505 aa26.93■■□□□ 1.9
PKD1-225ENST00000562297 EEA1Q15075 1411 aa26.92■■□□□ 1.9
PKD1-225ENST00000562297 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
PKD1-225ENST00000562297 DNAJC5BQ9UF47 199 aa26.87■■□□□ 1.89
PKD1-225ENST00000562297 NESP48681 1621 aa26.82■■□□□ 1.88
PKD1-225ENST00000562297 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
PKD1-225ENST00000562297 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
PKD1-225ENST00000562297 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
PKD1-225ENST00000562297 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
PKD1-225ENST00000562297 KIF21BO75037 1637 aa26.63■■□□□ 1.85
PKD1-225ENST00000562297 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
PKD1-225ENST00000562297 GOLGA3Q08378 1498 aa26.58■■□□□ 1.85
PKD1-225ENST00000562297 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.84
PKD1-225ENST00000562297 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
PKD1-225ENST00000562297 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
PKD1-225ENST00000562297 PDS5BQ9NTI5 1447 aa26.54■■□□□ 1.84
PKD1-225ENST00000562297 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
PKD1-225ENST00000562297 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
PKD1-225ENST00000562297 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
PKD1-225ENST00000562297 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
PKD1-225ENST00000562297 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
PKD1-225ENST00000562297 PRXQ9BXM0 1461 aa26.44■■□□□ 1.82
PKD1-225ENST00000562297 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
PKD1-225ENST00000562297 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
PKD1-225ENST00000562297 CUX2O14529 1486 aa26.41■■□□□ 1.82
PKD1-225ENST00000562297 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
PKD1-225ENST00000562297 ERICH3Q5RHP9 1530 aa26.4■■□□□ 1.82
PKD1-225ENST00000562297 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
PKD1-225ENST00000562297 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
PKD1-225ENST00000562297 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
PKD1-225ENST00000562297 IGF1RP08069 1367 aa26.3■■□□□ 1.8
PKD1-225ENST00000562297 MRC2Q9UBG0 1479 aa26.22■■□□□ 1.79
PKD1-225ENST00000562297 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
PKD1-225ENST00000562297 TARBP1Q13395 1621 aaKnown RBP26.16■■□□□ 1.78
PKD1-225ENST00000562297 CLIP1P30622 1438 aa26.16■■□□□ 1.78
PKD1-225ENST00000562297 ABCA5Q8WWZ7 1642 aa26.15■■□□□ 1.78
PKD1-225ENST00000562297 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
PKD1-225ENST00000562297 WDR62O43379 1518 aa26.11■■□□□ 1.77
PKD1-225ENST00000562297 TRIM26Q12899 539 aaPredicted RBP26.1■■□□□ 1.77
PKD1-225ENST00000562297 CUL7Q14999 1698 aa26.08■■□□□ 1.77
PKD1-225ENST00000562297 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
PKD1-225ENST00000562297 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
PKD1-225ENST00000562297 ERCC6Q03468 1493 aa26.02■■□□□ 1.76
PKD1-225ENST00000562297 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
PKD1-225ENST00000562297 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
PKD1-225ENST00000562297 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
PKD1-225ENST00000562297 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
PKD1-225ENST00000562297 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
PKD1-225ENST00000562297 RANGAP1P46060 587 aaPredicted RBP25.92■■□□□ 1.74
PKD1-225ENST00000562297 PPARGC1BQ86YN6 1023 aaKnown RBP25.92■■□□□ 1.74
PKD1-225ENST00000562297 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.74
PKD1-225ENST00000562297 AQRO60306 1485 aaKnown RBP eCLIP25.86■■□□□ 1.731e-6■■■■■ 50
PKD1-225ENST00000562297 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
PKD1-225ENST00000562297 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
PKD1-225ENST00000562297 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
PKD1-225ENST00000562297 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms