RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 NISCHQ9Y2I1 1504 aa17.44■□□□□ 0.38
TUBGCP4-203ENST00000562053 CCDC180Q9P1Z9 1646 aa15.59■□□□□ 0.09
TUBGCP4-203ENST00000562053 ABCC9O60706 1549 aa15.04■□□□□ -0
TUBGCP4-203ENST00000562053 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
TUBGCP4-203ENST00000562053 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
TUBGCP4-203ENST00000562053 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
TUBGCP4-203ENST00000562053 NACADO15069 1562 aa14.56□□□□□ -0.08
TUBGCP4-203ENST00000562053 MYO15BQ96JP2 1530 aa14.53□□□□□ -0.08
TUBGCP4-203ENST00000562053 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
TUBGCP4-203ENST00000562053 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
TUBGCP4-203ENST00000562053 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
TUBGCP4-203ENST00000562053 CHIC1Q5VXU3 224 aa14.28□□□□□ -0.12
TUBGCP4-203ENST00000562053 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
TUBGCP4-203ENST00000562053 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
TUBGCP4-203ENST00000562053 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
TUBGCP4-203ENST00000562053 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
TUBGCP4-203ENST00000562053 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
TUBGCP4-203ENST00000562053 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
TUBGCP4-203ENST00000562053 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
TUBGCP4-203ENST00000562053 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
TUBGCP4-203ENST00000562053 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-203ENST00000562053 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
TUBGCP4-203ENST00000562053 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
TUBGCP4-203ENST00000562053 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
TUBGCP4-203ENST00000562053 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
TUBGCP4-203ENST00000562053 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
TUBGCP4-203ENST00000562053 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
TUBGCP4-203ENST00000562053 NCAPD3P42695 1498 aa13.39□□□□□ -0.27
TUBGCP4-203ENST00000562053 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
TUBGCP4-203ENST00000562053 WIZO95785 1651 aa13.31□□□□□ -0.28
TUBGCP4-203ENST00000562053 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
TUBGCP4-203ENST00000562053 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
TUBGCP4-203ENST00000562053 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
TUBGCP4-203ENST00000562053 NESP48681 1621 aa13.04□□□□□ -0.32
TUBGCP4-203ENST00000562053 PRDM2Q13029 1718 aa13□□□□□ -0.33
TUBGCP4-203ENST00000562053 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
TUBGCP4-203ENST00000562053 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
TUBGCP4-203ENST00000562053 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
TUBGCP4-203ENST00000562053 CFTRP13569 1480 aa12.96□□□□□ -0.34
TUBGCP4-203ENST00000562053 ERCC6Q03468 1493 aa12.96□□□□□ -0.34
TUBGCP4-203ENST00000562053 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
TUBGCP4-203ENST00000562053 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
TUBGCP4-203ENST00000562053 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
TUBGCP4-203ENST00000562053 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
TUBGCP4-203ENST00000562053 CUX2O14529 1486 aa12.85□□□□□ -0.35
TUBGCP4-203ENST00000562053 SUPT5HO00267 1087 aaKnown RBP12.83□□□□□ -0.36
TUBGCP4-203ENST00000562053 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
TUBGCP4-203ENST00000562053 WDR62O43379 1518 aa12.83□□□□□ -0.36
TUBGCP4-203ENST00000562053 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
TUBGCP4-203ENST00000562053 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
TUBGCP4-203ENST00000562053 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
TUBGCP4-203ENST00000562053 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
TUBGCP4-203ENST00000562053 CUX1P39880 1505 aa12.62□□□□□ -0.39
TUBGCP4-203ENST00000562053 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
TUBGCP4-203ENST00000562053 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
TUBGCP4-203ENST00000562053 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
TUBGCP4-203ENST00000562053 POLA1P09884 1462 aaPredicted RBP12.58□□□□□ -0.4
TUBGCP4-203ENST00000562053 IFT140Q96RY7 1462 aa12.57□□□□□ -0.4
TUBGCP4-203ENST00000562053 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
TUBGCP4-203ENST00000562053 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
TUBGCP4-203ENST00000562053 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
TUBGCP4-203ENST00000562053 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
TUBGCP4-203ENST00000562053 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
TUBGCP4-203ENST00000562053 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
TUBGCP4-203ENST00000562053 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP4-203ENST00000562053 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
TUBGCP4-203ENST00000562053 ABCA5Q8WWZ7 1642 aa12.45□□□□□ -0.42
TUBGCP4-203ENST00000562053 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
TUBGCP4-203ENST00000562053 SOGA1O94964 1423 aa12.44□□□□□ -0.42
TUBGCP4-203ENST00000562053 PBRM1Q86U86 1689 aa12.43□□□□□ -0.42
TUBGCP4-203ENST00000562053 AQRO60306 1485 aaKnown RBP eCLIP12.39□□□□□ -0.43
TUBGCP4-203ENST00000562053 SENP3Q9H4L4 574 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP4-203ENST00000562053 CHD1O14646 1710 aa12.37□□□□□ -0.43
TUBGCP4-203ENST00000562053 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
TUBGCP4-203ENST00000562053 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
TUBGCP4-203ENST00000562053 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
TUBGCP4-203ENST00000562053 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
TUBGCP4-203ENST00000562053 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
TUBGCP4-203ENST00000562053 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
TUBGCP4-203ENST00000562053 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
TUBGCP4-203ENST00000562053 SYNJ2O15056 1496 aa12.27□□□□□ -0.44
TUBGCP4-203ENST00000562053 CUL7Q14999 1698 aa12.25□□□□□ -0.45
TUBGCP4-203ENST00000562053 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
TUBGCP4-203ENST00000562053 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
TUBGCP4-203ENST00000562053 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
TUBGCP4-203ENST00000562053 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
TUBGCP4-203ENST00000562053 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
TUBGCP4-203ENST00000562053 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
TUBGCP4-203ENST00000562053 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
TUBGCP4-203ENST00000562053 NUP160Q12769 1436 aa12.16□□□□□ -0.46
TUBGCP4-203ENST00000562053 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
TUBGCP4-203ENST00000562053 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 RIMBP3CA6NJZ7 1639 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 RIMBP3BA6NNM3 1639 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 RIMBP3Q9UFD9 1639 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 FBLN2P98095 1184 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 IGF1RP08069 1367 aa12.13□□□□□ -0.47
TUBGCP4-203ENST00000562053 SHROOM2Q13796 1616 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms