RNA–Protein interactions for RNA: ENST00000562048.5

CDH5-203, Transcript of cadherin 5, humanhuman

TSL 3

Gene CDH5, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-203ENST00000562048 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
CDH5-203ENST00000562048 CCDC180Q9P1Z9 1646 aa27.53■■■□□ 2
CDH5-203ENST00000562048 ABCC9O60706 1549 aa26.11■■□□□ 1.77
CDH5-203ENST00000562048 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
CDH5-203ENST00000562048 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
CDH5-203ENST00000562048 MYO15BQ96JP2 1530 aa25.84■■□□□ 1.73
CDH5-203ENST00000562048 NACADO15069 1562 aa25.72■■□□□ 1.71
CDH5-203ENST00000562048 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
CDH5-203ENST00000562048 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
CDH5-203ENST00000562048 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
CDH5-203ENST00000562048 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
CDH5-203ENST00000562048 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
CDH5-203ENST00000562048 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
CDH5-203ENST00000562048 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
CDH5-203ENST00000562048 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
CDH5-203ENST00000562048 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
CDH5-203ENST00000562048 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
CDH5-203ENST00000562048 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
CDH5-203ENST00000562048 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
CDH5-203ENST00000562048 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
CDH5-203ENST00000562048 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
CDH5-203ENST00000562048 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
CDH5-203ENST00000562048 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
CDH5-203ENST00000562048 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
CDH5-203ENST00000562048 WIZO95785 1651 aa23.73■■□□□ 1.39
CDH5-203ENST00000562048 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
CDH5-203ENST00000562048 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
CDH5-203ENST00000562048 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
CDH5-203ENST00000562048 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
CDH5-203ENST00000562048 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
CDH5-203ENST00000562048 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
CDH5-203ENST00000562048 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
CDH5-203ENST00000562048 CFTRP13569 1480 aa23■■□□□ 1.27
CDH5-203ENST00000562048 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
CDH5-203ENST00000562048 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
CDH5-203ENST00000562048 PRDM2Q13029 1718 aa22.98■■□□□ 1.27
CDH5-203ENST00000562048 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
CDH5-203ENST00000562048 NESP48681 1621 aa22.76■■□□□ 1.23
CDH5-203ENST00000562048 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
CDH5-203ENST00000562048 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
CDH5-203ENST00000562048 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
CDH5-203ENST00000562048 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
CDH5-203ENST00000562048 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
CDH5-203ENST00000562048 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
CDH5-203ENST00000562048 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
CDH5-203ENST00000562048 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
CDH5-203ENST00000562048 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
CDH5-203ENST00000562048 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
CDH5-203ENST00000562048 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
CDH5-203ENST00000562048 CUX1P39880 1505 aa22.45■■□□□ 1.18
CDH5-203ENST00000562048 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
CDH5-203ENST00000562048 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
CDH5-203ENST00000562048 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
CDH5-203ENST00000562048 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
CDH5-203ENST00000562048 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
CDH5-203ENST00000562048 WDR62O43379 1518 aa22.39■■□□□ 1.17
CDH5-203ENST00000562048 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
CDH5-203ENST00000562048 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
CDH5-203ENST00000562048 SOGA1O94964 1423 aa22.18■■□□□ 1.14
CDH5-203ENST00000562048 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
CDH5-203ENST00000562048 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
CDH5-203ENST00000562048 EEA1Q15075 1411 aa22.16■■□□□ 1.14
CDH5-203ENST00000562048 CUX2O14529 1486 aa22.15■■□□□ 1.14
CDH5-203ENST00000562048 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
CDH5-203ENST00000562048 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
CDH5-203ENST00000562048 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
CDH5-203ENST00000562048 RAD54L2Q9Y4B4 1467 aa22.08■■□□□ 1.12
CDH5-203ENST00000562048 ABCA5Q8WWZ7 1642 aa22.01■■□□□ 1.11
CDH5-203ENST00000562048 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
CDH5-203ENST00000562048 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
CDH5-203ENST00000562048 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
CDH5-203ENST00000562048 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
CDH5-203ENST00000562048 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
CDH5-203ENST00000562048 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
CDH5-203ENST00000562048 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
CDH5-203ENST00000562048 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
CDH5-203ENST00000562048 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
CDH5-203ENST00000562048 CUL7Q14999 1698 aa21.88■■□□□ 1.09
CDH5-203ENST00000562048 IGF1RP08069 1367 aa21.87■■□□□ 1.09
CDH5-203ENST00000562048 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.09
CDH5-203ENST00000562048 KIF21BO75037 1637 aa21.83■■□□□ 1.08
CDH5-203ENST00000562048 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
CDH5-203ENST00000562048 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
CDH5-203ENST00000562048 MAGI1Q96QZ7 1491 aaPredicted RBP21.79■■□□□ 1.08
CDH5-203ENST00000562048 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
CDH5-203ENST00000562048 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
CDH5-203ENST00000562048 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
CDH5-203ENST00000562048 ADAMTS12P58397 1594 aa21.73■■□□□ 1.07
CDH5-203ENST00000562048 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
CDH5-203ENST00000562048 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
CDH5-203ENST00000562048 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
CDH5-203ENST00000562048 GRIN2AQ12879 1464 aa21.58■■□□□ 1.04
CDH5-203ENST00000562048 TNIKQ9UKE5 1360 aa21.57■■□□□ 1.04
CDH5-203ENST00000562048 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
CDH5-203ENST00000562048 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
CDH5-203ENST00000562048 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
CDH5-203ENST00000562048 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
CDH5-203ENST00000562048 CHD1O14646 1710 aa21.52■■□□□ 1.03
CDH5-203ENST00000562048 NUP160Q12769 1436 aa21.48■■□□□ 1.03
CDH5-203ENST00000562048 KIAA0586Q9BVV6 1533 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms