RNA–Protein interactions for RNA: ENST00000562001.1

PGP-202, Transcript of phosphoglycolate phosphatase, humanhuman

TSL 2

Gene PGP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGP-202ENST00000562001 NISCHQ9Y2I1 1504 aa37.72■■■■□ 3.63
PGP-202ENST00000562001 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
PGP-202ENST00000562001 ABCC9O60706 1549 aa32.68■■■□□ 2.82
PGP-202ENST00000562001 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
PGP-202ENST00000562001 RB1CC1Q8TDY2 1594 aa31.43■■■□□ 2.62
PGP-202ENST00000562001 NACADO15069 1562 aa31.43■■■□□ 2.62
PGP-202ENST00000562001 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
PGP-202ENST00000562001 DCAF8L2P0C7V8 631 aa31.26■■■□□ 2.59
PGP-202ENST00000562001 DCAF1Q9Y4B6 1507 aa31.2■■■□□ 2.59
PGP-202ENST00000562001 UNC13AQ9UPW8 1703 aa30.93■■■□□ 2.54
PGP-202ENST00000562001 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
PGP-202ENST00000562001 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
PGP-202ENST00000562001 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
PGP-202ENST00000562001 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
PGP-202ENST00000562001 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
PGP-202ENST00000562001 EIF4G1Q04637 1599 aaKnown RBP29.74■■■□□ 2.35
PGP-202ENST00000562001 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
PGP-202ENST00000562001 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
PGP-202ENST00000562001 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
PGP-202ENST00000562001 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
PGP-202ENST00000562001 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
PGP-202ENST00000562001 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
PGP-202ENST00000562001 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.23
PGP-202ENST00000562001 NCAPD3P42695 1498 aa29■■■□□ 2.23
PGP-202ENST00000562001 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
PGP-202ENST00000562001 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
PGP-202ENST00000562001 WIZO95785 1651 aa28.83■■■□□ 2.21
PGP-202ENST00000562001 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
PGP-202ENST00000562001 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
PGP-202ENST00000562001 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
PGP-202ENST00000562001 NESP48681 1621 aa28.37■■■□□ 2.13
PGP-202ENST00000562001 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
PGP-202ENST00000562001 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
PGP-202ENST00000562001 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
PGP-202ENST00000562001 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
PGP-202ENST00000562001 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
PGP-202ENST00000562001 CFTRP13569 1480 aa28.03■■■□□ 2.08
PGP-202ENST00000562001 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
PGP-202ENST00000562001 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
PGP-202ENST00000562001 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
PGP-202ENST00000562001 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
PGP-202ENST00000562001 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
PGP-202ENST00000562001 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
PGP-202ENST00000562001 CUX2O14529 1486 aa27.77■■■□□ 2.04
PGP-202ENST00000562001 MRC2Q9UBG0 1479 aa27.74■■■□□ 2.03
PGP-202ENST00000562001 WDR62O43379 1518 aa27.71■■■□□ 2.03
PGP-202ENST00000562001 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.02
PGP-202ENST00000562001 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
PGP-202ENST00000562001 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
PGP-202ENST00000562001 CUX1P39880 1505 aa27.31■■□□□ 1.96
PGP-202ENST00000562001 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
PGP-202ENST00000562001 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
PGP-202ENST00000562001 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
PGP-202ENST00000562001 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
PGP-202ENST00000562001 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
PGP-202ENST00000562001 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
PGP-202ENST00000562001 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
PGP-202ENST00000562001 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
PGP-202ENST00000562001 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
PGP-202ENST00000562001 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
PGP-202ENST00000562001 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
PGP-202ENST00000562001 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
PGP-202ENST00000562001 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
PGP-202ENST00000562001 SOGA1O94964 1423 aa27.01■■□□□ 1.91
PGP-202ENST00000562001 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91
PGP-202ENST00000562001 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
PGP-202ENST00000562001 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.89
PGP-202ENST00000562001 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
PGP-202ENST00000562001 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
PGP-202ENST00000562001 DNAJC5Q9H3Z4 198 aa26.78■■□□□ 1.88
PGP-202ENST00000562001 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
PGP-202ENST00000562001 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
PGP-202ENST00000562001 CHD1O14646 1710 aa26.73■■□□□ 1.87
PGP-202ENST00000562001 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
PGP-202ENST00000562001 MAGI1Q96QZ7 1491 aaPredicted RBP26.64■■□□□ 1.86
PGP-202ENST00000562001 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
PGP-202ENST00000562001 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
PGP-202ENST00000562001 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
PGP-202ENST00000562001 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
PGP-202ENST00000562001 FBLN2P98095 1184 aa26.46■■□□□ 1.83
PGP-202ENST00000562001 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
PGP-202ENST00000562001 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
PGP-202ENST00000562001 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
PGP-202ENST00000562001 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
PGP-202ENST00000562001 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
PGP-202ENST00000562001 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
PGP-202ENST00000562001 IGF1RP08069 1367 aa26.38■■□□□ 1.81
PGP-202ENST00000562001 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
PGP-202ENST00000562001 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
PGP-202ENST00000562001 CUL7Q14999 1698 aa26.34■■□□□ 1.81
PGP-202ENST00000562001 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
PGP-202ENST00000562001 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
PGP-202ENST00000562001 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
PGP-202ENST00000562001 NUP160Q12769 1436 aa26.31■■□□□ 1.8
PGP-202ENST00000562001 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
PGP-202ENST00000562001 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
PGP-202ENST00000562001 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
PGP-202ENST00000562001 SHROOM2Q13796 1616 aa26.16■■□□□ 1.78
PGP-202ENST00000562001 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
PGP-202ENST00000562001 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms