RNA–Protein interactions for RNA: ENST00000561962.1

PDPK1-214, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 4

Gene PDPK1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-214ENST00000561962 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
PDPK1-214ENST00000561962 ABCC9O60706 1549 aa24.05■■□□□ 1.44
PDPK1-214ENST00000561962 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
PDPK1-214ENST00000561962 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
PDPK1-214ENST00000561962 NACADO15069 1562 aa22.76■■□□□ 1.23
PDPK1-214ENST00000561962 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
PDPK1-214ENST00000561962 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
PDPK1-214ENST00000561962 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
PDPK1-214ENST00000561962 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
PDPK1-214ENST00000561962 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
PDPK1-214ENST00000561962 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.13
PDPK1-214ENST00000561962 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
PDPK1-214ENST00000561962 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
PDPK1-214ENST00000561962 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
PDPK1-214ENST00000561962 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
PDPK1-214ENST00000561962 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
PDPK1-214ENST00000561962 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
PDPK1-214ENST00000561962 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
PDPK1-214ENST00000561962 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
PDPK1-214ENST00000561962 NCAPD3P42695 1498 aa21■□□□□ 0.95
PDPK1-214ENST00000561962 CUX2O14529 1486 aa20.9■□□□□ 0.94
PDPK1-214ENST00000561962 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
PDPK1-214ENST00000561962 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
PDPK1-214ENST00000561962 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
PDPK1-214ENST00000561962 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
PDPK1-214ENST00000561962 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
PDPK1-214ENST00000561962 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
PDPK1-214ENST00000561962 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
PDPK1-214ENST00000561962 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
PDPK1-214ENST00000561962 NESP48681 1621 aa20.57■□□□□ 0.88
PDPK1-214ENST00000561962 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
PDPK1-214ENST00000561962 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
PDPK1-214ENST00000561962 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
PDPK1-214ENST00000561962 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
PDPK1-214ENST00000561962 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
PDPK1-214ENST00000561962 KIF21AQ7Z4S6 1674 aa20.31■□□□□ 0.84
PDPK1-214ENST00000561962 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
PDPK1-214ENST00000561962 WIZO95785 1651 aa20.18■□□□□ 0.82
PDPK1-214ENST00000561962 WDR62O43379 1518 aa20.17■□□□□ 0.82
PDPK1-214ENST00000561962 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
PDPK1-214ENST00000561962 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
PDPK1-214ENST00000561962 CFTRP13569 1480 aa20.07■□□□□ 0.8
PDPK1-214ENST00000561962 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
PDPK1-214ENST00000561962 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
PDPK1-214ENST00000561962 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
PDPK1-214ENST00000561962 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
PDPK1-214ENST00000561962 URB2Q14146 1524 aaKnown RBP19.87■□□□□ 0.77
PDPK1-214ENST00000561962 PRDM2Q13029 1718 aa19.81■□□□□ 0.76
PDPK1-214ENST00000561962 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
PDPK1-214ENST00000561962 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
PDPK1-214ENST00000561962 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
PDPK1-214ENST00000561962 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
PDPK1-214ENST00000561962 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
PDPK1-214ENST00000561962 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
PDPK1-214ENST00000561962 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
PDPK1-214ENST00000561962 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
PDPK1-214ENST00000561962 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
PDPK1-214ENST00000561962 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
PDPK1-214ENST00000561962 ARHGEF11O15085 1522 aa19.52■□□□□ 0.72
PDPK1-214ENST00000561962 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDPK1-214ENST00000561962 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
PDPK1-214ENST00000561962 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
PDPK1-214ENST00000561962 FBLN2P98095 1184 aa19.45■□□□□ 0.7
PDPK1-214ENST00000561962 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
PDPK1-214ENST00000561962 SOGA1O94964 1423 aa19.42■□□□□ 0.7
PDPK1-214ENST00000561962 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
PDPK1-214ENST00000561962 CHD1O14646 1710 aa19.39■□□□□ 0.7
PDPK1-214ENST00000561962 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
PDPK1-214ENST00000561962 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
PDPK1-214ENST00000561962 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
PDPK1-214ENST00000561962 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
PDPK1-214ENST00000561962 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
PDPK1-214ENST00000561962 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
PDPK1-214ENST00000561962 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
PDPK1-214ENST00000561962 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
PDPK1-214ENST00000561962 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
PDPK1-214ENST00000561962 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
PDPK1-214ENST00000561962 CUX1P39880 1505 aa19.24■□□□□ 0.67
PDPK1-214ENST00000561962 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
PDPK1-214ENST00000561962 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
PDPK1-214ENST00000561962 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
PDPK1-214ENST00000561962 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
PDPK1-214ENST00000561962 PBRM1Q86U86 1689 aa19.08■□□□□ 0.65
PDPK1-214ENST00000561962 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
PDPK1-214ENST00000561962 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
PDPK1-214ENST00000561962 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
PDPK1-214ENST00000561962 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
PDPK1-214ENST00000561962 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
PDPK1-214ENST00000561962 NUP160Q12769 1436 aa18.94■□□□□ 0.62
PDPK1-214ENST00000561962 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
PDPK1-214ENST00000561962 ADAMTS12P58397 1594 aa18.92■□□□□ 0.62
PDPK1-214ENST00000561962 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
PDPK1-214ENST00000561962 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
PDPK1-214ENST00000561962 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
PDPK1-214ENST00000561962 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
PDPK1-214ENST00000561962 SHROOM2Q13796 1616 aa18.83■□□□□ 0.61
PDPK1-214ENST00000561962 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
PDPK1-214ENST00000561962 JPH4Q96JJ6 628 aa18.8■□□□□ 0.6
PDPK1-214ENST00000561962 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
PDPK1-214ENST00000561962 NPM1P06748 294 aaKnown RBP eCLIP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms