RNA–Protein interactions for RNA: ENST00000561710.1

GFER-202, Transcript of growth factor, augmenter of liver regeneration, humanhuman

TSL 2

Gene GFER, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFER-202ENST00000561710 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
GFER-202ENST00000561710 CCDC180Q9P1Z9 1646 aa48.15■■■■■ 5.3
GFER-202ENST00000561710 ABCC9O60706 1549 aa45.86■■■■■ 4.93
GFER-202ENST00000561710 ZCCHC6Q5VYS8 1495 aaKnown RBP45.75■■■■■ 4.91
GFER-202ENST00000561710 DCAF1Q9Y4B6 1507 aa45.35■■■■■ 4.85
GFER-202ENST00000561710 DCAF8L2P0C7V8 631 aa45.2■■■■■ 4.83
GFER-202ENST00000561710 MYO15BQ96JP2 1530 aa45.12■■■■■ 4.81
GFER-202ENST00000561710 NACADO15069 1562 aa45■■■■■ 4.79
GFER-202ENST00000561710 RB1CC1Q8TDY2 1594 aa44.77■■■■■ 4.76
GFER-202ENST00000561710 SCRIBQ14160 1630 aa43.92■■■■■ 4.62
GFER-202ENST00000561710 SHROOM4Q9ULL8 1493 aa43.79■■■■■ 4.6
GFER-202ENST00000561710 UNC13AQ9UPW8 1703 aa43.65■■■■■ 4.58
GFER-202ENST00000561710 BICRAQ9NZM4 1560 aa43.2■■■■■ 4.51
GFER-202ENST00000561710 PABPN1Q86U42 306 aaKnown RBP eCLIP43.02■■■■■ 4.48
GFER-202ENST00000561710 BAZ1AQ9NRL2 1556 aaPredicted RBP42.34■■■■■ 4.37
GFER-202ENST00000561710 CECR2Q9BXF3 1484 aa42.32■■■■■ 4.37
GFER-202ENST00000561710 SMARCA4P51532 1647 aa42.16■■■■■ 4.34
GFER-202ENST00000561710 MROH2BQ7Z745 1585 aa42.06■■■■■ 4.32
GFER-202ENST00000561710 EIF4G1Q04637 1599 aaKnown RBP42.05■■■■■ 4.32
GFER-202ENST00000561710 RSF1Q96T23 1441 aaPredicted RBP42.03■■■■■ 4.32
GFER-202ENST00000561710 SUPT5HO00267 1087 aaKnown RBP41.87■■■■■ 4.29
GFER-202ENST00000561710 PEG3Q9GZU2 1588 aa41.76■■■■■ 4.27
GFER-202ENST00000561710 SMARCA2P51531 1590 aa41.73■■■■■ 4.27
GFER-202ENST00000561710 WIZO95785 1651 aa41.69■■■■■ 4.26
GFER-202ENST00000561710 ATAD2BQ9ULI0 1458 aa41.61■■■■■ 4.25
GFER-202ENST00000561710 CC2D2AQ9P2K1 1620 aa41.57■■■■■ 4.25
GFER-202ENST00000561710 NCAPD3P42695 1498 aa41.45■■■■■ 4.23
GFER-202ENST00000561710 BAZ1BQ9UIG0 1483 aaKnown RBP41.4■■■■■ 4.22
GFER-202ENST00000561710 TOP2AP11388 1531 aaKnown RBP41.39■■■■■ 4.22
GFER-202ENST00000561710 HMGXB3Q12766 1538 aa41.39■■■■■ 4.22
GFER-202ENST00000561710 DNAJC5BQ9UF47 199 aa40.89■■■■■ 4.14
GFER-202ENST00000561710 CCDC88BA6NC98 1476 aa40.84■■■■■ 4.13
GFER-202ENST00000561710 CADPSQ9ULU8 1353 aa40.32■■■■■ 4.04
GFER-202ENST00000561710 CFTRP13569 1480 aa40.31■■■■■ 4.04
GFER-202ENST00000561710 LAMC3Q9Y6N6 1575 aa40.23■■■■■ 4.03
GFER-202ENST00000561710 PRDM2Q13029 1718 aa40.18■■■■■ 4.02
GFER-202ENST00000561710 NESP48681 1621 aa39.98■■■■□ 3.99
GFER-202ENST00000561710 PDS5BQ9NTI5 1447 aa39.94■■■■□ 3.98
GFER-202ENST00000561710 FANCD2Q9BXW9 1451 aa39.84■■■■□ 3.97
GFER-202ENST00000561710 CHIC1Q5VXU3 224 aa39.75■■■■□ 3.95
GFER-202ENST00000561710 CEP164Q9UPV0 1460 aa39.72■■■■□ 3.95
GFER-202ENST00000561710 WRNQ14191 1432 aaPredicted RBP eCLIP39.67■■■■□ 3.94
GFER-202ENST00000561710 ABCC8Q09428 1581 aa39.67■■■■□ 3.94
GFER-202ENST00000561710 KIF21AQ7Z4S6 1674 aa39.62■■■■□ 3.93
GFER-202ENST00000561710 TRIM41Q8WV44 630 aa39.58■■■■□ 3.93
GFER-202ENST00000561710 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
GFER-202ENST00000561710 TOP2BQ02880 1626 aa39.46■■■■□ 3.91
GFER-202ENST00000561710 BIVM-ERCC5R4GMW8 1640 aa39.44■■■■□ 3.9
GFER-202ENST00000561710 SYNJ1O43426 1573 aa39.42■■■■□ 3.9
GFER-202ENST00000561710 DNMBPQ6XZF7 1577 aa39.42■■■■□ 3.9
GFER-202ENST00000561710 CUX1P39880 1505 aa39.41■■■■□ 3.9
GFER-202ENST00000561710 MRC2Q9UBG0 1479 aa39.4■■■■□ 3.9
GFER-202ENST00000561710 TOPBP1Q92547 1522 aa39.31■■■■□ 3.88
GFER-202ENST00000561710 URB2Q14146 1524 aaKnown RBP39.3■■■■□ 3.88
GFER-202ENST00000561710 WDR62O43379 1518 aa39.2■■■■□ 3.87
GFER-202ENST00000561710 THOC2Q8NI27 1593 aaKnown RBP39.18■■■■□ 3.86
GFER-202ENST00000561710 FGD5Q6ZNL6 1462 aa39.12■■■■□ 3.85
GFER-202ENST00000561710 POLA1P09884 1462 aaPredicted RBP39.05■■■■□ 3.84
GFER-202ENST00000561710 SOGA1O94964 1423 aa38.96■■■■□ 3.83
GFER-202ENST00000561710 EEA1Q15075 1411 aa38.91■■■■□ 3.82
GFER-202ENST00000561710 ABCA10Q8WWZ4 1543 aa38.85■■■■□ 3.81
GFER-202ENST00000561710 IFT140Q96RY7 1462 aa38.85■■■■□ 3.81
GFER-202ENST00000561710 RAD54L2Q9Y4B4 1467 aa38.81■■■■□ 3.8
GFER-202ENST00000561710 KIF27Q86VH2 1401 aa38.8■■■■□ 3.8
GFER-202ENST00000561710 CUX2O14529 1486 aa38.79■■■■□ 3.8
GFER-202ENST00000561710 TARBP1Q13395 1621 aaKnown RBP38.78■■■■□ 3.8
GFER-202ENST00000561710 WDR97A6NE52 1622 aa38.75■■■■□ 3.79
GFER-202ENST00000561710 FAM9AQ8IZU1 332 aaPredicted RBP38.61■■■■□ 3.77
GFER-202ENST00000561710 RUSC2Q8N2Y8 1516 aa38.59■■■■□ 3.77
GFER-202ENST00000561710 CSRNP3Q8WYN3 585 aa38.58■■■■□ 3.77
GFER-202ENST00000561710 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
GFER-202ENST00000561710 GAPVD1Q14C86 1478 aa38.54■■■■□ 3.76
GFER-202ENST00000561710 TDRD9Q8NDG6 1382 aaKnown RBP38.52■■■■□ 3.76
GFER-202ENST00000561710 ERICH3Q5RHP9 1530 aa38.44■■■■□ 3.74
GFER-202ENST00000561710 ZNF608Q9ULD9 1512 aaPredicted RBP38.43■■■■□ 3.74
GFER-202ENST00000561710 EIF4G3O43432 1585 aaKnown RBP38.4■■■■□ 3.74
GFER-202ENST00000561710 IGF1RP08069 1367 aa38.4■■■■□ 3.74
GFER-202ENST00000561710 AQRO60306 1485 aaKnown RBP eCLIP38.4■■■■□ 3.74
GFER-202ENST00000561710 GRIN2BQ13224 1484 aa38.38■■■■□ 3.73
GFER-202ENST00000561710 PBRM1Q86U86 1689 aa38.37■■■■□ 3.73
GFER-202ENST00000561710 CUL7Q14999 1698 aa38.35■■■■□ 3.73
GFER-202ENST00000561710 KIF21BO75037 1637 aa38.32■■■■□ 3.73
GFER-202ENST00000561710 PRXQ9BXM0 1461 aa38.27■■■■□ 3.72
GFER-202ENST00000561710 CARMIL1Q5VZK9 1371 aa38.26■■■■□ 3.72
GFER-202ENST00000561710 GOLGA3Q08378 1498 aa38.21■■■■□ 3.71
GFER-202ENST00000561710 MAGI1Q96QZ7 1491 aaPredicted RBP38.18■■■■□ 3.7
GFER-202ENST00000561710 RAPGEF2Q9Y4G8 1499 aa38.18■■■■□ 3.7
GFER-202ENST00000561710 FHAD1B1AJZ9 1412 aa38.15■■■■□ 3.7
GFER-202ENST00000561710 ADAMTS12P58397 1594 aa38.11■■■■□ 3.69
GFER-202ENST00000561710 SNAPC4Q5SXM2 1469 aa38.11■■■■□ 3.69
GFER-202ENST00000561710 LOC105371045A0A1W2PR82 267 aa38.06■■■■□ 3.68
GFER-202ENST00000561710 UBTFP17480 764 aaKnown RBP38.01■■■■□ 3.68
GFER-202ENST00000561710 SYNJ2O15056 1496 aa37.99■■■■□ 3.67
GFER-202ENST00000561710 EHMT2Q96KQ7 1210 aa37.96■■■■□ 3.67
GFER-202ENST00000561710 TNIKQ9UKE5 1360 aa37.93■■■■□ 3.66
GFER-202ENST00000561710 CHMP7Q8WUX9 453 aaPredicted RBP37.91■■■■□ 3.66
GFER-202ENST00000561710 GRIN2AQ12879 1464 aa37.86■■■■□ 3.65
GFER-202ENST00000561710 FBLN2P98095 1184 aa37.79■■■■□ 3.64
GFER-202ENST00000561710 CTTNBP2Q8WZ74 1663 aa37.76■■■■□ 3.64
GFER-202ENST00000561710 CHD1O14646 1710 aa37.7■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms