RNA–Protein interactions for RNA: ENST00000561435.5

PSME1-210, Transcript of proteasome activator subunit 1, humanhuman

TSL 2 BASIC

Gene PSME1, Length 945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-210ENST00000561435 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
PSME1-210ENST00000561435 ABCC9O60706 1549 aa26.03■■□□□ 1.76
PSME1-210ENST00000561435 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
PSME1-210ENST00000561435 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
PSME1-210ENST00000561435 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
PSME1-210ENST00000561435 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
PSME1-210ENST00000561435 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.484e-6■□□□□ 11
PSME1-210ENST00000561435 NACADO15069 1562 aa24.24■■□□□ 1.47
PSME1-210ENST00000561435 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
PSME1-210ENST00000561435 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
PSME1-210ENST00000561435 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
PSME1-210ENST00000561435 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
PSME1-210ENST00000561435 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
PSME1-210ENST00000561435 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
PSME1-210ENST00000561435 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
PSME1-210ENST00000561435 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
PSME1-210ENST00000561435 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
PSME1-210ENST00000561435 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
PSME1-210ENST00000561435 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
PSME1-210ENST00000561435 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
PSME1-210ENST00000561435 CUX2O14529 1486 aa22.43■■□□□ 1.18
PSME1-210ENST00000561435 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
PSME1-210ENST00000561435 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
PSME1-210ENST00000561435 NESP48681 1621 aa22.26■■□□□ 1.15
PSME1-210ENST00000561435 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
PSME1-210ENST00000561435 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
PSME1-210ENST00000561435 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
PSME1-210ENST00000561435 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
PSME1-210ENST00000561435 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
PSME1-210ENST00000561435 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
PSME1-210ENST00000561435 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
PSME1-210ENST00000561435 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
PSME1-210ENST00000561435 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
PSME1-210ENST00000561435 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
PSME1-210ENST00000561435 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
PSME1-210ENST00000561435 KIF21AQ7Z4S6 1674 aa21.84■■□□□ 1.09
PSME1-210ENST00000561435 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
PSME1-210ENST00000561435 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
PSME1-210ENST00000561435 WIZO95785 1651 aa21.63■■□□□ 1.05
PSME1-210ENST00000561435 WDR62O43379 1518 aa21.6■■□□□ 1.05
PSME1-210ENST00000561435 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
PSME1-210ENST00000561435 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
PSME1-210ENST00000561435 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
PSME1-210ENST00000561435 CFTRP13569 1480 aa21.43■■□□□ 1.02
PSME1-210ENST00000561435 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
PSME1-210ENST00000561435 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
PSME1-210ENST00000561435 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
PSME1-210ENST00000561435 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
PSME1-210ENST00000561435 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
PSME1-210ENST00000561435 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
PSME1-210ENST00000561435 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
PSME1-210ENST00000561435 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
PSME1-210ENST00000561435 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
PSME1-210ENST00000561435 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
PSME1-210ENST00000561435 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
PSME1-210ENST00000561435 ARHGEF11O15085 1522 aa21.06■□□□□ 0.96
PSME1-210ENST00000561435 FBLN2P98095 1184 aa21.03■□□□□ 0.96
PSME1-210ENST00000561435 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
PSME1-210ENST00000561435 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.959e-8■■■■■ 27.5
PSME1-210ENST00000561435 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
PSME1-210ENST00000561435 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
PSME1-210ENST00000561435 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
PSME1-210ENST00000561435 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
PSME1-210ENST00000561435 CHD1O14646 1710 aa20.85■□□□□ 0.93
PSME1-210ENST00000561435 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
PSME1-210ENST00000561435 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
PSME1-210ENST00000561435 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
PSME1-210ENST00000561435 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
PSME1-210ENST00000561435 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
PSME1-210ENST00000561435 SOGA1O94964 1423 aa20.8■□□□□ 0.92
PSME1-210ENST00000561435 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
PSME1-210ENST00000561435 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
PSME1-210ENST00000561435 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
PSME1-210ENST00000561435 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
PSME1-210ENST00000561435 CUX1P39880 1505 aa20.6■□□□□ 0.89
PSME1-210ENST00000561435 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
PSME1-210ENST00000561435 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
PSME1-210ENST00000561435 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
PSME1-210ENST00000561435 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
PSME1-210ENST00000561435 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
PSME1-210ENST00000561435 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
PSME1-210ENST00000561435 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
PSME1-210ENST00000561435 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
PSME1-210ENST00000561435 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
PSME1-210ENST00000561435 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
PSME1-210ENST00000561435 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
PSME1-210ENST00000561435 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
PSME1-210ENST00000561435 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
PSME1-210ENST00000561435 WRNQ14191 1432 aaPredicted RBP eCLIP20.3■□□□□ 0.84
PSME1-210ENST00000561435 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
PSME1-210ENST00000561435 NUP160Q12769 1436 aa20.25■□□□□ 0.83
PSME1-210ENST00000561435 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
PSME1-210ENST00000561435 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
PSME1-210ENST00000561435 JPH4Q96JJ6 628 aa20.17■□□□□ 0.82
PSME1-210ENST00000561435 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
PSME1-210ENST00000561435 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
PSME1-210ENST00000561435 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
PSME1-210ENST00000561435 FAM69CQ0P6D2 419 aa20.11■□□□□ 0.81
PSME1-210ENST00000561435 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
PSME1-210ENST00000561435 NPM1P06748 294 aaKnown RBP eCLIP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms