RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 NISCHQ9Y2I1 1504 aa45.53■■■■■ 4.88
IRF9-215ENST00000561415 CCDC180Q9P1Z9 1646 aa40.02■■■■■ 4
IRF9-215ENST00000561415 ZCCHC6Q5VYS8 1495 aaKnown RBP38.16■■■■□ 3.7
IRF9-215ENST00000561415 ABCC9O60706 1549 aa38.14■■■■□ 3.7
IRF9-215ENST00000561415 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
IRF9-215ENST00000561415 DCAF8L2P0C7V8 631 aa37.56■■■■□ 3.6
IRF9-215ENST00000561415 MYO15BQ96JP2 1530 aa37.48■■■■□ 3.59
IRF9-215ENST00000561415 NACADO15069 1562 aa37.35■■■■□ 3.57
IRF9-215ENST00000561415 RB1CC1Q8TDY2 1594 aa37.14■■■■□ 3.54
IRF9-215ENST00000561415 SCRIBQ14160 1630 aa36.62■■■■□ 3.45
IRF9-215ENST00000561415 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
IRF9-215ENST00000561415 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
IRF9-215ENST00000561415 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
IRF9-215ENST00000561415 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
IRF9-215ENST00000561415 CECR2Q9BXF3 1484 aa35.35■■■■□ 3.25
IRF9-215ENST00000561415 BAZ1AQ9NRL2 1556 aaPredicted RBP35.22■■■■□ 3.23
IRF9-215ENST00000561415 SMARCA4P51532 1647 aa35.12■■■■□ 3.21
IRF9-215ENST00000561415 MROH2BQ7Z745 1585 aa35.12■■■■□ 3.21
IRF9-215ENST00000561415 RSF1Q96T23 1441 aaPredicted RBP35.08■■■■□ 3.21
IRF9-215ENST00000561415 EIF4G1Q04637 1599 aaKnown RBP34.97■■■■□ 3.19
IRF9-215ENST00000561415 SUPT5HO00267 1087 aaKnown RBP34.97■■■■□ 3.19
IRF9-215ENST00000561415 WIZO95785 1651 aa34.81■■■■□ 3.16
IRF9-215ENST00000561415 PEG3Q9GZU2 1588 aa34.76■■■■□ 3.16
IRF9-215ENST00000561415 SMARCA2P51531 1590 aa34.65■■■■□ 3.14
IRF9-215ENST00000561415 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
IRF9-215ENST00000561415 CC2D2AQ9P2K1 1620 aa34.57■■■■□ 3.12
IRF9-215ENST00000561415 TOP2AP11388 1531 aaKnown RBP34.48■■■■□ 3.11
IRF9-215ENST00000561415 NCAPD3P42695 1498 aa34.45■■■■□ 3.11
IRF9-215ENST00000561415 BAZ1BQ9UIG0 1483 aaKnown RBP34.42■■■■□ 3.1
IRF9-215ENST00000561415 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
IRF9-215ENST00000561415 CCDC88BA6NC98 1476 aa34.06■■■■□ 3.04
IRF9-215ENST00000561415 DNAJC5BQ9UF47 199 aa34.04■■■■□ 3.04
IRF9-215ENST00000561415 CFTRP13569 1480 aa33.54■■■□□ 2.96
IRF9-215ENST00000561415 CADPSQ9ULU8 1353 aa33.5■■■□□ 2.95
IRF9-215ENST00000561415 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
IRF9-215ENST00000561415 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
IRF9-215ENST00000561415 NESP48681 1621 aa33.33■■■□□ 2.93
IRF9-215ENST00000561415 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
IRF9-215ENST00000561415 ABCC8Q09428 1581 aa33.17■■■□□ 2.9
IRF9-215ENST00000561415 FANCD2Q9BXW9 1451 aa33.13■■■□□ 2.89
IRF9-215ENST00000561415 PDS5BQ9NTI5 1447 aa33.1■■■□□ 2.89
IRF9-215ENST00000561415 WRNQ14191 1432 aaPredicted RBP eCLIP33.05■■■□□ 2.88
IRF9-215ENST00000561415 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
IRF9-215ENST00000561415 CEP164Q9UPV0 1460 aa32.99■■■□□ 2.87
IRF9-215ENST00000561415 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
IRF9-215ENST00000561415 SYNJ1O43426 1573 aa32.94■■■□□ 2.86
IRF9-215ENST00000561415 CUX1P39880 1505 aa32.89■■■□□ 2.86
IRF9-215ENST00000561415 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
IRF9-215ENST00000561415 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
IRF9-215ENST00000561415 DNMBPQ6XZF7 1577 aa32.78■■■□□ 2.84
IRF9-215ENST00000561415 ERCC6Q03468 1493 aa32.78■■■□□ 2.84
IRF9-215ENST00000561415 URB2Q14146 1524 aaKnown RBP32.75■■■□□ 2.83
IRF9-215ENST00000561415 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
IRF9-215ENST00000561415 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
IRF9-215ENST00000561415 THOC2Q8NI27 1593 aaKnown RBP32.61■■■□□ 2.81
IRF9-215ENST00000561415 WDR62O43379 1518 aa32.6■■■□□ 2.81
IRF9-215ENST00000561415 FGD5Q6ZNL6 1462 aa32.6■■■□□ 2.81
IRF9-215ENST00000561415 POLA1P09884 1462 aaPredicted RBP32.53■■■□□ 2.8
IRF9-215ENST00000561415 SOGA1O94964 1423 aa32.42■■■□□ 2.78
IRF9-215ENST00000561415 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
IRF9-215ENST00000561415 EEA1Q15075 1411 aa32.34■■■□□ 2.77
IRF9-215ENST00000561415 ABCA10Q8WWZ4 1543 aa32.33■■■□□ 2.77
IRF9-215ENST00000561415 CUX2O14529 1486 aa32.33■■■□□ 2.77
IRF9-215ENST00000561415 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
IRF9-215ENST00000561415 WDR97A6NE52 1622 aa32.32■■■□□ 2.76
IRF9-215ENST00000561415 TARBP1Q13395 1621 aaKnown RBP32.31■■■□□ 2.76
IRF9-215ENST00000561415 FAM9AQ8IZU1 332 aaPredicted RBP32.27■■■□□ 2.76
IRF9-215ENST00000561415 KIF27Q86VH2 1401 aa32.26■■■□□ 2.76
IRF9-215ENST00000561415 IFT140Q96RY7 1462 aa32.24■■■□□ 2.75
IRF9-215ENST00000561415 ABCA5Q8WWZ7 1642 aa32.14■■■□□ 2.74
IRF9-215ENST00000561415 CSRNP3Q8WYN3 585 aa32.12■■■□□ 2.73
IRF9-215ENST00000561415 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
IRF9-215ENST00000561415 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
IRF9-215ENST00000561415 ZNF608Q9ULD9 1512 aaPredicted RBP32.03■■■□□ 2.72
IRF9-215ENST00000561415 IGF1RP08069 1367 aa32■■■□□ 2.71
IRF9-215ENST00000561415 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
IRF9-215ENST00000561415 AQRO60306 1485 aaKnown RBP eCLIP31.97■■■□□ 2.713e-7■■■■■ 33.8
IRF9-215ENST00000561415 KIF21BO75037 1637 aa31.96■■■□□ 2.71
IRF9-215ENST00000561415 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
IRF9-215ENST00000561415 PBRM1Q86U86 1689 aa31.95■■■□□ 2.7
IRF9-215ENST00000561415 PRXQ9BXM0 1461 aa31.93■■■□□ 2.7
IRF9-215ENST00000561415 LOC105371045A0A1W2PR82 267 aa31.9■■■□□ 2.7
IRF9-215ENST00000561415 CUL7Q14999 1698 aa31.89■■■□□ 2.7
IRF9-215ENST00000561415 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
IRF9-215ENST00000561415 GOLGA3Q08378 1498 aa31.85■■■□□ 2.69
IRF9-215ENST00000561415 CARMIL1Q5VZK9 1371 aa31.82■■■□□ 2.69
IRF9-215ENST00000561415 RAPGEF2Q9Y4G8 1499 aa31.82■■■□□ 2.68
IRF9-215ENST00000561415 EHMT2Q96KQ7 1210 aa31.78■■■□□ 2.68
IRF9-215ENST00000561415 ADAMTS12P58397 1594 aa31.74■■■□□ 2.67
IRF9-215ENST00000561415 SNAPC4Q5SXM2 1469 aa31.72■■■□□ 2.67
IRF9-215ENST00000561415 MAGI1Q96QZ7 1491 aaPredicted RBP31.7■■■□□ 2.67
IRF9-215ENST00000561415 FHAD1B1AJZ9 1412 aa31.7■■■□□ 2.66
IRF9-215ENST00000561415 UBTFP17480 764 aaKnown RBP31.63■■■□□ 2.65
IRF9-215ENST00000561415 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
IRF9-215ENST00000561415 SYNJ2O15056 1496 aa31.56■■■□□ 2.64
IRF9-215ENST00000561415 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
IRF9-215ENST00000561415 CTTNBP2Q8WZ74 1663 aa31.46■■■□□ 2.63
IRF9-215ENST00000561415 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
IRF9-215ENST00000561415 CEP162Q5TB80 1403 aa31.42■■■□□ 2.62
IRF9-215ENST00000561415 CHD1O14646 1710 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms