RNA–Protein interactions for RNA: ENST00000561405.1

UBE2CP4-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 4, humanhuman

BASIC

Gene UBE2CP4, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP4-201ENST00000561405 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
UBE2CP4-201ENST00000561405 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
UBE2CP4-201ENST00000561405 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
UBE2CP4-201ENST00000561405 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
UBE2CP4-201ENST00000561405 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
UBE2CP4-201ENST00000561405 ABCC9O60706 1549 aa16.06■□□□□ 0.16
UBE2CP4-201ENST00000561405 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
UBE2CP4-201ENST00000561405 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
UBE2CP4-201ENST00000561405 NACADO15069 1562 aa15.41■□□□□ 0.06
UBE2CP4-201ENST00000561405 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
UBE2CP4-201ENST00000561405 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
UBE2CP4-201ENST00000561405 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
UBE2CP4-201ENST00000561405 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
UBE2CP4-201ENST00000561405 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
UBE2CP4-201ENST00000561405 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
UBE2CP4-201ENST00000561405 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
UBE2CP4-201ENST00000561405 FOXD1Q16676 465 aa14.92□□□□□ -0.02
UBE2CP4-201ENST00000561405 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
UBE2CP4-201ENST00000561405 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
UBE2CP4-201ENST00000561405 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
UBE2CP4-201ENST00000561405 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
UBE2CP4-201ENST00000561405 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
UBE2CP4-201ENST00000561405 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
UBE2CP4-201ENST00000561405 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
UBE2CP4-201ENST00000561405 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
UBE2CP4-201ENST00000561405 ADRA2BP18089 450 aa14.31□□□□□ -0.12
UBE2CP4-201ENST00000561405 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
UBE2CP4-201ENST00000561405 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
UBE2CP4-201ENST00000561405 BAZ1AQ9NRL2 1556 aaPredicted RBP14.21□□□□□ -0.14
UBE2CP4-201ENST00000561405 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
UBE2CP4-201ENST00000561405 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
UBE2CP4-201ENST00000561405 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
UBE2CP4-201ENST00000561405 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
UBE2CP4-201ENST00000561405 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
UBE2CP4-201ENST00000561405 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
UBE2CP4-201ENST00000561405 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
UBE2CP4-201ENST00000561405 WIZO95785 1651 aa13.94□□□□□ -0.18
UBE2CP4-201ENST00000561405 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
UBE2CP4-201ENST00000561405 NESP48681 1621 aa13.88□□□□□ -0.19
UBE2CP4-201ENST00000561405 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
UBE2CP4-201ENST00000561405 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
UBE2CP4-201ENST00000561405 CUX2O14529 1486 aa13.8□□□□□ -0.2
UBE2CP4-201ENST00000561405 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
UBE2CP4-201ENST00000561405 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
UBE2CP4-201ENST00000561405 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
UBE2CP4-201ENST00000561405 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
UBE2CP4-201ENST00000561405 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
UBE2CP4-201ENST00000561405 CFTRP13569 1480 aa13.7□□□□□ -0.22
UBE2CP4-201ENST00000561405 MSH5O43196 834 aa13.7□□□□□ -0.22
UBE2CP4-201ENST00000561405 CCDC88BA6NC98 1476 aa13.63□□□□□ -0.23
UBE2CP4-201ENST00000561405 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
UBE2CP4-201ENST00000561405 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
UBE2CP4-201ENST00000561405 WDR62O43379 1518 aa13.6□□□□□ -0.23
UBE2CP4-201ENST00000561405 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
UBE2CP4-201ENST00000561405 PRDM2Q13029 1718 aa13.57□□□□□ -0.24
UBE2CP4-201ENST00000561405 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
UBE2CP4-201ENST00000561405 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
UBE2CP4-201ENST00000561405 ABCC8Q09428 1581 aa13.4□□□□□ -0.26
UBE2CP4-201ENST00000561405 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
UBE2CP4-201ENST00000561405 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
UBE2CP4-201ENST00000561405 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
UBE2CP4-201ENST00000561405 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
UBE2CP4-201ENST00000561405 IFT140Q96RY7 1462 aa13.35□□□□□ -0.27
UBE2CP4-201ENST00000561405 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
UBE2CP4-201ENST00000561405 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
UBE2CP4-201ENST00000561405 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.29
UBE2CP4-201ENST00000561405 CUX1P39880 1505 aa13.25□□□□□ -0.29
UBE2CP4-201ENST00000561405 EIF4G3O43432 1585 aaKnown RBP13.22□□□□□ -0.29
UBE2CP4-201ENST00000561405 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
UBE2CP4-201ENST00000561405 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
UBE2CP4-201ENST00000561405 SOGA1O94964 1423 aa13.2□□□□□ -0.3
UBE2CP4-201ENST00000561405 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE2CP4-201ENST00000561405 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
UBE2CP4-201ENST00000561405 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
UBE2CP4-201ENST00000561405 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
UBE2CP4-201ENST00000561405 TDRD9Q8NDG6 1382 aaKnown RBP13.13□□□□□ -0.31
UBE2CP4-201ENST00000561405 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
UBE2CP4-201ENST00000561405 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
UBE2CP4-201ENST00000561405 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
UBE2CP4-201ENST00000561405 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
UBE2CP4-201ENST00000561405 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
UBE2CP4-201ENST00000561405 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
UBE2CP4-201ENST00000561405 CHD1O14646 1710 aa13.07□□□□□ -0.32
UBE2CP4-201ENST00000561405 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
UBE2CP4-201ENST00000561405 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
UBE2CP4-201ENST00000561405 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
UBE2CP4-201ENST00000561405 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
UBE2CP4-201ENST00000561405 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
UBE2CP4-201ENST00000561405 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
UBE2CP4-201ENST00000561405 SYNJ2O15056 1496 aa13.01□□□□□ -0.33
UBE2CP4-201ENST00000561405 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
UBE2CP4-201ENST00000561405 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
UBE2CP4-201ENST00000561405 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
UBE2CP4-201ENST00000561405 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
UBE2CP4-201ENST00000561405 FBLN2P98095 1184 aa12.98□□□□□ -0.33
UBE2CP4-201ENST00000561405 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
UBE2CP4-201ENST00000561405 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
UBE2CP4-201ENST00000561405 CLASP1Q7Z460 1538 aa12.96□□□□□ -0.33
UBE2CP4-201ENST00000561405 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
UBE2CP4-201ENST00000561405 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms