RNA–Protein interactions for RNA: ENST00000561374.1

PDE8A-216, Transcript of phosphodiesterase 8A, humanhuman

TSL 4

Gene PDE8A, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-216ENST00000561374 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
PDE8A-216ENST00000561374 ABCC9O60706 1549 aa35.18■■■■□ 3.22
PDE8A-216ENST00000561374 CCDC180Q9P1Z9 1646 aa34.14■■■■□ 3.06
PDE8A-216ENST00000561374 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
PDE8A-216ENST00000561374 RB1CC1Q8TDY2 1594 aa32.99■■■□□ 2.87
PDE8A-216ENST00000561374 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
PDE8A-216ENST00000561374 NACADO15069 1562 aa32.48■■■□□ 2.79
PDE8A-216ENST00000561374 UNC13AQ9UPW8 1703 aa32.27■■■□□ 2.76
PDE8A-216ENST00000561374 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
PDE8A-216ENST00000561374 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
PDE8A-216ENST00000561374 CECR2Q9BXF3 1484 aa31.76■■■□□ 2.67
PDE8A-216ENST00000561374 DNAJC5Q9H3Z4 198 aa31.7■■■□□ 2.67
PDE8A-216ENST00000561374 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
PDE8A-216ENST00000561374 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
PDE8A-216ENST00000561374 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
PDE8A-216ENST00000561374 EIF4G1Q04637 1599 aaKnown RBP31.37■■■□□ 2.61
PDE8A-216ENST00000561374 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
PDE8A-216ENST00000561374 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
PDE8A-216ENST00000561374 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
PDE8A-216ENST00000561374 CUX2O14529 1486 aa30.65■■■□□ 2.5
PDE8A-216ENST00000561374 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
PDE8A-216ENST00000561374 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
PDE8A-216ENST00000561374 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
PDE8A-216ENST00000561374 NESP48681 1621 aa29.93■■■□□ 2.38
PDE8A-216ENST00000561374 THOC2Q8NI27 1593 aaKnown RBP29.81■■■□□ 2.36
PDE8A-216ENST00000561374 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
PDE8A-216ENST00000561374 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
PDE8A-216ENST00000561374 SMARCA2P51531 1590 aa29.68■■■□□ 2.34
PDE8A-216ENST00000561374 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
PDE8A-216ENST00000561374 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
PDE8A-216ENST00000561374 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
PDE8A-216ENST00000561374 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
PDE8A-216ENST00000561374 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
PDE8A-216ENST00000561374 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.28
PDE8A-216ENST00000561374 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
PDE8A-216ENST00000561374 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
PDE8A-216ENST00000561374 WDR62O43379 1518 aa29.15■■■□□ 2.26
PDE8A-216ENST00000561374 OSCARQ8IYS5 282 aa29.07■■■□□ 2.24
PDE8A-216ENST00000561374 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
PDE8A-216ENST00000561374 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
PDE8A-216ENST00000561374 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
PDE8A-216ENST00000561374 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
PDE8A-216ENST00000561374 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
PDE8A-216ENST00000561374 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
PDE8A-216ENST00000561374 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
PDE8A-216ENST00000561374 ARHGEF11O15085 1522 aa28.67■■■□□ 2.18
PDE8A-216ENST00000561374 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
PDE8A-216ENST00000561374 WIZO95785 1651 aa28.59■■■□□ 2.17
PDE8A-216ENST00000561374 TRHP20396 242 aaPredicted RBP28.58■■■□□ 2.17
PDE8A-216ENST00000561374 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
PDE8A-216ENST00000561374 CFTRP13569 1480 aa28.5■■■□□ 2.15
PDE8A-216ENST00000561374 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
PDE8A-216ENST00000561374 ZNF608Q9ULD9 1512 aaPredicted RBP28.42■■■□□ 2.14
PDE8A-216ENST00000561374 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
PDE8A-216ENST00000561374 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
PDE8A-216ENST00000561374 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
PDE8A-216ENST00000561374 CHD1O14646 1710 aa28.23■■■□□ 2.11
PDE8A-216ENST00000561374 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
PDE8A-216ENST00000561374 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
PDE8A-216ENST00000561374 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
PDE8A-216ENST00000561374 TOPBP1Q92547 1522 aa28.11■■■□□ 2.09
PDE8A-216ENST00000561374 FBLN2P98095 1184 aa28.1■■■□□ 2.09
PDE8A-216ENST00000561374 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
PDE8A-216ENST00000561374 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
PDE8A-216ENST00000561374 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
PDE8A-216ENST00000561374 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
PDE8A-216ENST00000561374 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
PDE8A-216ENST00000561374 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
PDE8A-216ENST00000561374 POLA1P09884 1462 aaPredicted RBP27.76■■■□□ 2.03
PDE8A-216ENST00000561374 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
PDE8A-216ENST00000561374 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
PDE8A-216ENST00000561374 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.03
PDE8A-216ENST00000561374 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
PDE8A-216ENST00000561374 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
PDE8A-216ENST00000561374 GAPVD1Q14C86 1478 aa27.62■■■□□ 2.01
PDE8A-216ENST00000561374 SOGA1O94964 1423 aa27.59■■■□□ 2.01
PDE8A-216ENST00000561374 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
PDE8A-216ENST00000561374 WDR97A6NE52 1622 aa27.52■■■□□ 2
PDE8A-216ENST00000561374 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
PDE8A-216ENST00000561374 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
PDE8A-216ENST00000561374 FGD5Q6ZNL6 1462 aa27.47■■□□□ 1.99
PDE8A-216ENST00000561374 PBRM1Q86U86 1689 aa27.37■■□□□ 1.97
PDE8A-216ENST00000561374 ERCC6L2Q5T890 1561 aa27.36■■□□□ 1.97
PDE8A-216ENST00000561374 ILDR1Q86SU0 546 aaPredicted RBP27.32■■□□□ 1.96
PDE8A-216ENST00000561374 KIF13AQ9H1H9 1805 aa27.28■■□□□ 1.96
PDE8A-216ENST00000561374 CUX1P39880 1505 aa27.27■■□□□ 1.96
PDE8A-216ENST00000561374 CEP170Q5SW79 1584 aa27.2■■□□□ 1.94
PDE8A-216ENST00000561374 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
PDE8A-216ENST00000561374 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
PDE8A-216ENST00000561374 KDM4FA0A1W2PPD8 638 aa27.08■■□□□ 1.93
PDE8A-216ENST00000561374 NUP160Q12769 1436 aa27.05■■□□□ 1.92
PDE8A-216ENST00000561374 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
PDE8A-216ENST00000561374 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
PDE8A-216ENST00000561374 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
PDE8A-216ENST00000561374 FAM69CQ0P6D2 419 aa27.03■■□□□ 1.92
PDE8A-216ENST00000561374 KDM6BO15054 1643 aa26.98■■□□□ 1.91
PDE8A-216ENST00000561374 ABCC10Q5T3U5 1492 aa26.97■■□□□ 1.91
PDE8A-216ENST00000561374 DIP2BQ9P265 1576 aa26.92■■□□□ 1.9
PDE8A-216ENST00000561374 PRG4Q92954 1404 aaPredicted RBP26.91■■□□□ 1.9
PDE8A-216ENST00000561374 NPM1P06748 294 aaKnown RBP eCLIP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms