RNA–Protein interactions for RNA: ENST00000561280.5

CHP1-209, Transcript of calcineurin like EF-hand protein 1, humanhuman

TSL 4

Gene CHP1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHP1-209ENST00000561280 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
CHP1-209ENST00000561280 ABCC9O60706 1549 aa26.43■■□□□ 1.82
CHP1-209ENST00000561280 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
CHP1-209ENST00000561280 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
CHP1-209ENST00000561280 NACADO15069 1562 aa24.93■■□□□ 1.58
CHP1-209ENST00000561280 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
CHP1-209ENST00000561280 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
CHP1-209ENST00000561280 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
CHP1-209ENST00000561280 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
CHP1-209ENST00000561280 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
CHP1-209ENST00000561280 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
CHP1-209ENST00000561280 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
CHP1-209ENST00000561280 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
CHP1-209ENST00000561280 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
CHP1-209ENST00000561280 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
CHP1-209ENST00000561280 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
CHP1-209ENST00000561280 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
CHP1-209ENST00000561280 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
CHP1-209ENST00000561280 DNAJC5Q9H3Z4 198 aa22.99■■□□□ 1.27
CHP1-209ENST00000561280 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
CHP1-209ENST00000561280 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
CHP1-209ENST00000561280 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
CHP1-209ENST00000561280 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
CHP1-209ENST00000561280 CUX2O14529 1486 aa22.86■■□□□ 1.25
CHP1-209ENST00000561280 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
CHP1-209ENST00000561280 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
CHP1-209ENST00000561280 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
CHP1-209ENST00000561280 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
CHP1-209ENST00000561280 NESP48681 1621 aa22.64■■□□□ 1.21
CHP1-209ENST00000561280 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
CHP1-209ENST00000561280 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
CHP1-209ENST00000561280 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
CHP1-209ENST00000561280 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
CHP1-209ENST00000561280 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
CHP1-209ENST00000561280 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
CHP1-209ENST00000561280 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
CHP1-209ENST00000561280 WIZO95785 1651 aa22.25■■□□□ 1.15
CHP1-209ENST00000561280 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.14
CHP1-209ENST00000561280 WDR62O43379 1518 aa22.11■■□□□ 1.13
CHP1-209ENST00000561280 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
CHP1-209ENST00000561280 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
CHP1-209ENST00000561280 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
CHP1-209ENST00000561280 CFTRP13569 1480 aa22■■□□□ 1.11
CHP1-209ENST00000561280 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
CHP1-209ENST00000561280 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
CHP1-209ENST00000561280 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
CHP1-209ENST00000561280 URB2Q14146 1524 aaKnown RBP21.83■■□□□ 1.09
CHP1-209ENST00000561280 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
CHP1-209ENST00000561280 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
CHP1-209ENST00000561280 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
CHP1-209ENST00000561280 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
CHP1-209ENST00000561280 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
CHP1-209ENST00000561280 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
CHP1-209ENST00000561280 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
CHP1-209ENST00000561280 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
CHP1-209ENST00000561280 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
CHP1-209ENST00000561280 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
CHP1-209ENST00000561280 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
CHP1-209ENST00000561280 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
CHP1-209ENST00000561280 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHP1-209ENST00000561280 FBLN2P98095 1184 aa21.4■■□□□ 1.02
CHP1-209ENST00000561280 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
CHP1-209ENST00000561280 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
CHP1-209ENST00000561280 CHD1O14646 1710 aa21.35■■□□□ 1.01
CHP1-209ENST00000561280 CYB5RLQ6IPT4 315 aa21.34■■□□□ 1.01
CHP1-209ENST00000561280 SOGA1O94964 1423 aa21.32■■□□□ 1
CHP1-209ENST00000561280 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
CHP1-209ENST00000561280 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
CHP1-209ENST00000561280 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
CHP1-209ENST00000561280 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
CHP1-209ENST00000561280 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
CHP1-209ENST00000561280 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
CHP1-209ENST00000561280 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
CHP1-209ENST00000561280 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
CHP1-209ENST00000561280 CUX1P39880 1505 aa21.15■□□□□ 0.98
CHP1-209ENST00000561280 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
CHP1-209ENST00000561280 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
CHP1-209ENST00000561280 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
CHP1-209ENST00000561280 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
CHP1-209ENST00000561280 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
CHP1-209ENST00000561280 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
CHP1-209ENST00000561280 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
CHP1-209ENST00000561280 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
CHP1-209ENST00000561280 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
CHP1-209ENST00000561280 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
CHP1-209ENST00000561280 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
CHP1-209ENST00000561280 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
CHP1-209ENST00000561280 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
CHP1-209ENST00000561280 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
CHP1-209ENST00000561280 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
CHP1-209ENST00000561280 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
CHP1-209ENST00000561280 NUP160Q12769 1436 aa20.75■□□□□ 0.91
CHP1-209ENST00000561280 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
CHP1-209ENST00000561280 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
CHP1-209ENST00000561280 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
CHP1-209ENST00000561280 ERCC6L2Q5T890 1561 aa20.71■□□□□ 0.91
CHP1-209ENST00000561280 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
CHP1-209ENST00000561280 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
CHP1-209ENST00000561280 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
CHP1-209ENST00000561280 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms