RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-222ENST00000561279 NISCHQ9Y2I1 1504 aa34.59■■■■□ 3.13
IDH3A-222ENST00000561279 ABCC9O60706 1549 aa31.09■■■□□ 2.57
IDH3A-222ENST00000561279 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
IDH3A-222ENST00000561279 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
IDH3A-222ENST00000561279 NACADO15069 1562 aa29.4■■■□□ 2.3
IDH3A-222ENST00000561279 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
IDH3A-222ENST00000561279 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
IDH3A-222ENST00000561279 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.23
IDH3A-222ENST00000561279 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
IDH3A-222ENST00000561279 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
IDH3A-222ENST00000561279 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
IDH3A-222ENST00000561279 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
IDH3A-222ENST00000561279 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
IDH3A-222ENST00000561279 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
IDH3A-222ENST00000561279 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
IDH3A-222ENST00000561279 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
IDH3A-222ENST00000561279 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
IDH3A-222ENST00000561279 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
IDH3A-222ENST00000561279 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
IDH3A-222ENST00000561279 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
IDH3A-222ENST00000561279 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
IDH3A-222ENST00000561279 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
IDH3A-222ENST00000561279 DNAJC5Q9H3Z4 198 aa26.93■■□□□ 1.9
IDH3A-222ENST00000561279 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
IDH3A-222ENST00000561279 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
IDH3A-222ENST00000561279 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
IDH3A-222ENST00000561279 CUX2O14529 1486 aa26.85■■□□□ 1.89
IDH3A-222ENST00000561279 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
IDH3A-222ENST00000561279 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
IDH3A-222ENST00000561279 NESP48681 1621 aa26.66■■□□□ 1.86
IDH3A-222ENST00000561279 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
IDH3A-222ENST00000561279 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
IDH3A-222ENST00000561279 PDS5BQ9NTI5 1447 aa26.44■■□□□ 1.82
IDH3A-222ENST00000561279 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
IDH3A-222ENST00000561279 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
IDH3A-222ENST00000561279 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
IDH3A-222ENST00000561279 WIZO95785 1651 aa26.29■■□□□ 1.8
IDH3A-222ENST00000561279 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
IDH3A-222ENST00000561279 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
IDH3A-222ENST00000561279 CEP164Q9UPV0 1460 aa26.05■■□□□ 1.76
IDH3A-222ENST00000561279 WDR62O43379 1518 aa26.05■■□□□ 1.76
IDH3A-222ENST00000561279 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
IDH3A-222ENST00000561279 CFTRP13569 1480 aa25.99■■□□□ 1.75
IDH3A-222ENST00000561279 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
IDH3A-222ENST00000561279 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
IDH3A-222ENST00000561279 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
IDH3A-222ENST00000561279 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
IDH3A-222ENST00000561279 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
IDH3A-222ENST00000561279 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
IDH3A-222ENST00000561279 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
IDH3A-222ENST00000561279 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
IDH3A-222ENST00000561279 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
IDH3A-222ENST00000561279 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
IDH3A-222ENST00000561279 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
IDH3A-222ENST00000561279 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
IDH3A-222ENST00000561279 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
IDH3A-222ENST00000561279 AQRO60306 1485 aaKnown RBP eCLIP25.24■■□□□ 1.63
IDH3A-222ENST00000561279 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
IDH3A-222ENST00000561279 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
IDH3A-222ENST00000561279 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
IDH3A-222ENST00000561279 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
IDH3A-222ENST00000561279 FBLN2P98095 1184 aa25.19■■□□□ 1.62
IDH3A-222ENST00000561279 SOGA1O94964 1423 aa25.18■■□□□ 1.62
IDH3A-222ENST00000561279 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
IDH3A-222ENST00000561279 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
IDH3A-222ENST00000561279 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
IDH3A-222ENST00000561279 CHD1O14646 1710 aa25.1■■□□□ 1.61
IDH3A-222ENST00000561279 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
IDH3A-222ENST00000561279 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
IDH3A-222ENST00000561279 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
IDH3A-222ENST00000561279 CUX1P39880 1505 aa25.01■■□□□ 1.59
IDH3A-222ENST00000561279 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
IDH3A-222ENST00000561279 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
IDH3A-222ENST00000561279 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
IDH3A-222ENST00000561279 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
IDH3A-222ENST00000561279 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
IDH3A-222ENST00000561279 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
IDH3A-222ENST00000561279 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
IDH3A-222ENST00000561279 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
IDH3A-222ENST00000561279 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
IDH3A-222ENST00000561279 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
IDH3A-222ENST00000561279 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
IDH3A-222ENST00000561279 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
IDH3A-222ENST00000561279 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
IDH3A-222ENST00000561279 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
IDH3A-222ENST00000561279 ABCA5Q8WWZ7 1642 aa24.71■■□□□ 1.55
IDH3A-222ENST00000561279 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
IDH3A-222ENST00000561279 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
IDH3A-222ENST00000561279 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
IDH3A-222ENST00000561279 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
IDH3A-222ENST00000561279 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
IDH3A-222ENST00000561279 NUP160Q12769 1436 aa24.51■■□□□ 1.51
IDH3A-222ENST00000561279 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
IDH3A-222ENST00000561279 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
IDH3A-222ENST00000561279 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
IDH3A-222ENST00000561279 SHROOM2Q13796 1616 aa24.36■■□□□ 1.49
IDH3A-222ENST00000561279 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
IDH3A-222ENST00000561279 PRG4Q92954 1404 aaPredicted RBP24.31■■□□□ 1.48
IDH3A-222ENST00000561279 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
IDH3A-222ENST00000561279 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms