RNA–Protein interactions for RNA: ENST00000561233.1

LINS1-213, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-213ENST00000561233 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
LINS1-213ENST00000561233 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
LINS1-213ENST00000561233 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
LINS1-213ENST00000561233 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
LINS1-213ENST00000561233 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
LINS1-213ENST00000561233 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
LINS1-213ENST00000561233 FOXD1Q16676 465 aa15.16■□□□□ 0.02
LINS1-213ENST00000561233 ABCC9O60706 1549 aa15.16■□□□□ 0.02
LINS1-213ENST00000561233 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
LINS1-213ENST00000561233 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
LINS1-213ENST00000561233 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
LINS1-213ENST00000561233 NACADO15069 1562 aa14.47□□□□□ -0.09
LINS1-213ENST00000561233 MSH5O43196 834 aa14.44□□□□□ -0.1
LINS1-213ENST00000561233 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
LINS1-213ENST00000561233 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
LINS1-213ENST00000561233 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
LINS1-213ENST00000561233 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINS1-213ENST00000561233 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
LINS1-213ENST00000561233 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
LINS1-213ENST00000561233 SCRIBQ14160 1630 aa14.08□□□□□ -0.16
LINS1-213ENST00000561233 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
LINS1-213ENST00000561233 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
LINS1-213ENST00000561233 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
LINS1-213ENST00000561233 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
LINS1-213ENST00000561233 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
LINS1-213ENST00000561233 ADRA2BP18089 450 aa13.74□□□□□ -0.21
LINS1-213ENST00000561233 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
LINS1-213ENST00000561233 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
LINS1-213ENST00000561233 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
LINS1-213ENST00000561233 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
LINS1-213ENST00000561233 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
LINS1-213ENST00000561233 ATAD2BQ9ULI0 1458 aa13.36□□□□□ -0.27
LINS1-213ENST00000561233 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
LINS1-213ENST00000561233 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
LINS1-213ENST00000561233 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
LINS1-213ENST00000561233 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
LINS1-213ENST00000561233 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
LINS1-213ENST00000561233 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
LINS1-213ENST00000561233 WIZO95785 1651 aa13.16□□□□□ -0.3
LINS1-213ENST00000561233 RSF1Q96T23 1441 aaPredicted RBP13.12□□□□□ -0.31
LINS1-213ENST00000561233 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
LINS1-213ENST00000561233 NESP48681 1621 aa13.08□□□□□ -0.32
LINS1-213ENST00000561233 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
LINS1-213ENST00000561233 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.33
LINS1-213ENST00000561233 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
LINS1-213ENST00000561233 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.34
LINS1-213ENST00000561233 CUX2O14529 1486 aa12.94□□□□□ -0.34
LINS1-213ENST00000561233 KIF21AQ7Z4S6 1674 aa12.92□□□□□ -0.34
LINS1-213ENST00000561233 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.35
LINS1-213ENST00000561233 CFTRP13569 1480 aa12.87□□□□□ -0.35
LINS1-213ENST00000561233 CCDC88BA6NC98 1476 aa12.86□□□□□ -0.35
LINS1-213ENST00000561233 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
LINS1-213ENST00000561233 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
LINS1-213ENST00000561233 MRC2Q9UBG0 1479 aa12.84□□□□□ -0.35
LINS1-213ENST00000561233 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
LINS1-213ENST00000561233 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
LINS1-213ENST00000561233 WDR62O43379 1518 aa12.78□□□□□ -0.36
LINS1-213ENST00000561233 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
LINS1-213ENST00000561233 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
LINS1-213ENST00000561233 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
LINS1-213ENST00000561233 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
LINS1-213ENST00000561233 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
LINS1-213ENST00000561233 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
LINS1-213ENST00000561233 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
LINS1-213ENST00000561233 DNAJC5Q9H3Z4 198 aa12.59□□□□□ -0.39
LINS1-213ENST00000561233 ABCC8Q09428 1581 aa12.59□□□□□ -0.39
LINS1-213ENST00000561233 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
LINS1-213ENST00000561233 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
LINS1-213ENST00000561233 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
LINS1-213ENST00000561233 CUX1P39880 1505 aa12.49□□□□□ -0.41
LINS1-213ENST00000561233 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
LINS1-213ENST00000561233 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
LINS1-213ENST00000561233 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
LINS1-213ENST00000561233 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.41
LINS1-213ENST00000561233 SOGA1O94964 1423 aa12.45□□□□□ -0.42
LINS1-213ENST00000561233 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINS1-213ENST00000561233 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
LINS1-213ENST00000561233 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
LINS1-213ENST00000561233 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
LINS1-213ENST00000561233 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
LINS1-213ENST00000561233 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
LINS1-213ENST00000561233 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
LINS1-213ENST00000561233 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
LINS1-213ENST00000561233 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
LINS1-213ENST00000561233 FBLN2P98095 1184 aa12.34□□□□□ -0.43
LINS1-213ENST00000561233 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
LINS1-213ENST00000561233 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
LINS1-213ENST00000561233 GRIN2BQ13224 1484 aa12.33□□□□□ -0.44
LINS1-213ENST00000561233 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
LINS1-213ENST00000561233 CHD1O14646 1710 aa12.31□□□□□ -0.44
LINS1-213ENST00000561233 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
LINS1-213ENST00000561233 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
LINS1-213ENST00000561233 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
LINS1-213ENST00000561233 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
LINS1-213ENST00000561233 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
LINS1-213ENST00000561233 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
LINS1-213ENST00000561233 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
LINS1-213ENST00000561233 RIMBP3CA6NJZ7 1639 aa12.2□□□□□ -0.46
LINS1-213ENST00000561233 RIMBP3BA6NNM3 1639 aa12.2□□□□□ -0.46
LINS1-213ENST00000561233 RIMBP3Q9UFD9 1639 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms