RNA–Protein interactions for RNA: ENST00000561217.1

TNFAIP2-211, Transcript of TNF alpha induced protein 2, humanhuman

TSL 3

Gene TNFAIP2, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-211ENST00000561217 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
TNFAIP2-211ENST00000561217 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
TNFAIP2-211ENST00000561217 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
TNFAIP2-211ENST00000561217 ABCC9O60706 1549 aa24.2■■□□□ 1.46
TNFAIP2-211ENST00000561217 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
TNFAIP2-211ENST00000561217 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.42
TNFAIP2-211ENST00000561217 PHF23Q9BUL5 403 aaPredicted RBP23.85■■□□□ 1.41
TNFAIP2-211ENST00000561217 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
TNFAIP2-211ENST00000561217 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
TNFAIP2-211ENST00000561217 NACADO15069 1562 aa22.63■■□□□ 1.21
TNFAIP2-211ENST00000561217 FOXD1Q16676 465 aa22.52■■□□□ 1.2
TNFAIP2-211ENST00000561217 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
TNFAIP2-211ENST00000561217 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
TNFAIP2-211ENST00000561217 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
TNFAIP2-211ENST00000561217 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
TNFAIP2-211ENST00000561217 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
TNFAIP2-211ENST00000561217 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
TNFAIP2-211ENST00000561217 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
TNFAIP2-211ENST00000561217 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
TNFAIP2-211ENST00000561217 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.08
TNFAIP2-211ENST00000561217 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
TNFAIP2-211ENST00000561217 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
TNFAIP2-211ENST00000561217 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
TNFAIP2-211ENST00000561217 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
TNFAIP2-211ENST00000561217 DNAJC5Q9H3Z4 198 aa21.33■■□□□ 1.01
TNFAIP2-211ENST00000561217 MSH5O43196 834 aa21.11■□□□□ 0.97
TNFAIP2-211ENST00000561217 PIAS4Q8N2W9 510 aaPredicted RBP21.06■□□□□ 0.96
TNFAIP2-211ENST00000561217 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
TNFAIP2-211ENST00000561217 CUX2O14529 1486 aa21■□□□□ 0.95
TNFAIP2-211ENST00000561217 ADRA2BP18089 450 aa20.97■□□□□ 0.95
TNFAIP2-211ENST00000561217 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
TNFAIP2-211ENST00000561217 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
TNFAIP2-211ENST00000561217 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
TNFAIP2-211ENST00000561217 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
TNFAIP2-211ENST00000561217 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
TNFAIP2-211ENST00000561217 NESP48681 1621 aa20.71■□□□□ 0.91
TNFAIP2-211ENST00000561217 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
TNFAIP2-211ENST00000561217 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
TNFAIP2-211ENST00000561217 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
TNFAIP2-211ENST00000561217 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
TNFAIP2-211ENST00000561217 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
TNFAIP2-211ENST00000561217 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
TNFAIP2-211ENST00000561217 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
TNFAIP2-211ENST00000561217 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
TNFAIP2-211ENST00000561217 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
TNFAIP2-211ENST00000561217 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
TNFAIP2-211ENST00000561217 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
TNFAIP2-211ENST00000561217 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
TNFAIP2-211ENST00000561217 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
TNFAIP2-211ENST00000561217 WDR62O43379 1518 aa20.21■□□□□ 0.83
TNFAIP2-211ENST00000561217 WIZO95785 1651 aa20.13■□□□□ 0.81
TNFAIP2-211ENST00000561217 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
TNFAIP2-211ENST00000561217 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
TNFAIP2-211ENST00000561217 CFTRP13569 1480 aa19.95■□□□□ 0.78
TNFAIP2-211ENST00000561217 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
TNFAIP2-211ENST00000561217 URB2Q14146 1524 aaKnown RBP19.91■□□□□ 0.78
TNFAIP2-211ENST00000561217 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
TNFAIP2-211ENST00000561217 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
TNFAIP2-211ENST00000561217 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
TNFAIP2-211ENST00000561217 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
TNFAIP2-211ENST00000561217 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
TNFAIP2-211ENST00000561217 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
TNFAIP2-211ENST00000561217 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
TNFAIP2-211ENST00000561217 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
TNFAIP2-211ENST00000561217 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
TNFAIP2-211ENST00000561217 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
TNFAIP2-211ENST00000561217 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
TNFAIP2-211ENST00000561217 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
TNFAIP2-211ENST00000561217 CHD1O14646 1710 aa19.53■□□□□ 0.72
TNFAIP2-211ENST00000561217 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.71
TNFAIP2-211ENST00000561217 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
TNFAIP2-211ENST00000561217 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
TNFAIP2-211ENST00000561217 TARBP1Q13395 1621 aaKnown RBP19.49■□□□□ 0.71
TNFAIP2-211ENST00000561217 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.71
TNFAIP2-211ENST00000561217 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
TNFAIP2-211ENST00000561217 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
TNFAIP2-211ENST00000561217 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
TNFAIP2-211ENST00000561217 FBLN2P98095 1184 aa19.36■□□□□ 0.69
TNFAIP2-211ENST00000561217 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.68
TNFAIP2-211ENST00000561217 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
TNFAIP2-211ENST00000561217 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
TNFAIP2-211ENST00000561217 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
TNFAIP2-211ENST00000561217 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
TNFAIP2-211ENST00000561217 SOGA1O94964 1423 aa19.26■□□□□ 0.67
TNFAIP2-211ENST00000561217 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
TNFAIP2-211ENST00000561217 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
TNFAIP2-211ENST00000561217 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
TNFAIP2-211ENST00000561217 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
TNFAIP2-211ENST00000561217 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
TNFAIP2-211ENST00000561217 CUX1P39880 1505 aa19.17■□□□□ 0.66
TNFAIP2-211ENST00000561217 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
TNFAIP2-211ENST00000561217 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
TNFAIP2-211ENST00000561217 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
TNFAIP2-211ENST00000561217 SYNJ2O15056 1496 aa19.14■□□□□ 0.65
TNFAIP2-211ENST00000561217 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
TNFAIP2-211ENST00000561217 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
TNFAIP2-211ENST00000561217 ABCA5Q8WWZ7 1642 aa19.01■□□□□ 0.63
TNFAIP2-211ENST00000561217 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
TNFAIP2-211ENST00000561217 ERCC6L2Q5T890 1561 aa18.97■□□□□ 0.63
TNFAIP2-211ENST00000561217 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms