RNA–Protein interactions for RNA: ENST00000561113.1

LHX4-203, Transcript of LIM homeobox 4, humanhuman

TSL 2

Gene LHX4, Length 603 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-203ENST00000561113 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
LHX4-203ENST00000561113 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
LHX4-203ENST00000561113 ABCC9O60706 1549 aa29.37■■■□□ 2.29
LHX4-203ENST00000561113 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
LHX4-203ENST00000561113 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
LHX4-203ENST00000561113 NACADO15069 1562 aa28.2■■■□□ 2.11
LHX4-203ENST00000561113 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
LHX4-203ENST00000561113 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
LHX4-203ENST00000561113 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
LHX4-203ENST00000561113 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
LHX4-203ENST00000561113 SCRIBQ14160 1630 aa27.51■■□□□ 1.99
LHX4-203ENST00000561113 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
LHX4-203ENST00000561113 BICRAQ9NZM4 1560 aa27.4■■□□□ 1.98
LHX4-203ENST00000561113 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
LHX4-203ENST00000561113 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
LHX4-203ENST00000561113 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
LHX4-203ENST00000561113 CC2D2AQ9P2K1 1620 aa26.58■■□□□ 1.85
LHX4-203ENST00000561113 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
LHX4-203ENST00000561113 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
LHX4-203ENST00000561113 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.79
LHX4-203ENST00000561113 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
LHX4-203ENST00000561113 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
LHX4-203ENST00000561113 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
LHX4-203ENST00000561113 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
LHX4-203ENST00000561113 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
LHX4-203ENST00000561113 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
LHX4-203ENST00000561113 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
LHX4-203ENST00000561113 WIZO95785 1651 aa25.87■■□□□ 1.73
LHX4-203ENST00000561113 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
LHX4-203ENST00000561113 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
LHX4-203ENST00000561113 NESP48681 1621 aa25.45■■□□□ 1.66
LHX4-203ENST00000561113 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
LHX4-203ENST00000561113 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
LHX4-203ENST00000561113 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
LHX4-203ENST00000561113 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
LHX4-203ENST00000561113 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
LHX4-203ENST00000561113 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
LHX4-203ENST00000561113 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
LHX4-203ENST00000561113 CFTRP13569 1480 aa25.12■■□□□ 1.61
LHX4-203ENST00000561113 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
LHX4-203ENST00000561113 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
LHX4-203ENST00000561113 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
LHX4-203ENST00000561113 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
LHX4-203ENST00000561113 CUX2O14529 1486 aa24.95■■□□□ 1.58
LHX4-203ENST00000561113 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
LHX4-203ENST00000561113 WDR62O43379 1518 aa24.83■■□□□ 1.57
LHX4-203ENST00000561113 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
LHX4-203ENST00000561113 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
LHX4-203ENST00000561113 DNMBPQ6XZF7 1577 aa24.61■■□□□ 1.53
LHX4-203ENST00000561113 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
LHX4-203ENST00000561113 CUX1P39880 1505 aa24.47■■□□□ 1.51
LHX4-203ENST00000561113 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
LHX4-203ENST00000561113 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
LHX4-203ENST00000561113 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
LHX4-203ENST00000561113 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
LHX4-203ENST00000561113 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
LHX4-203ENST00000561113 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
LHX4-203ENST00000561113 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
LHX4-203ENST00000561113 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
LHX4-203ENST00000561113 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
LHX4-203ENST00000561113 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
LHX4-203ENST00000561113 SOGA1O94964 1423 aa24.29■■□□□ 1.48
LHX4-203ENST00000561113 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
LHX4-203ENST00000561113 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
LHX4-203ENST00000561113 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.47
LHX4-203ENST00000561113 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
LHX4-203ENST00000561113 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
LHX4-203ENST00000561113 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
LHX4-203ENST00000561113 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
LHX4-203ENST00000561113 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
LHX4-203ENST00000561113 CHD1O14646 1710 aa24.04■■□□□ 1.44
LHX4-203ENST00000561113 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
LHX4-203ENST00000561113 GRIN2BQ13224 1484 aa24■■□□□ 1.43
LHX4-203ENST00000561113 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
LHX4-203ENST00000561113 FBLN2P98095 1184 aa23.93■■□□□ 1.42
LHX4-203ENST00000561113 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
LHX4-203ENST00000561113 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
LHX4-203ENST00000561113 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
LHX4-203ENST00000561113 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
LHX4-203ENST00000561113 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
LHX4-203ENST00000561113 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
LHX4-203ENST00000561113 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
LHX4-203ENST00000561113 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
LHX4-203ENST00000561113 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
LHX4-203ENST00000561113 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
LHX4-203ENST00000561113 CUL7Q14999 1698 aa23.68■■□□□ 1.38
LHX4-203ENST00000561113 CLASP1Q7Z460 1538 aa23.66■■□□□ 1.38
LHX4-203ENST00000561113 IGF1RP08069 1367 aa23.65■■□□□ 1.38
LHX4-203ENST00000561113 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
LHX4-203ENST00000561113 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
LHX4-203ENST00000561113 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
LHX4-203ENST00000561113 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
LHX4-203ENST00000561113 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
LHX4-203ENST00000561113 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
LHX4-203ENST00000561113 NUP160Q12769 1436 aa23.56■■□□□ 1.36
LHX4-203ENST00000561113 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
LHX4-203ENST00000561113 CARMIL1Q5VZK9 1371 aa23.53■■□□□ 1.36
LHX4-203ENST00000561113 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
LHX4-203ENST00000561113 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
LHX4-203ENST00000561113 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms