RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 NISCHQ9Y2I1 1504 aa35.94■■■■□ 3.34
SPG21-213ENST00000561078 CCDC180Q9P1Z9 1646 aa32.03■■■□□ 2.72
SPG21-213ENST00000561078 ABCC9O60706 1549 aa31.53■■■□□ 2.64
SPG21-213ENST00000561078 RB1CC1Q8TDY2 1594 aa30.29■■■□□ 2.44
SPG21-213ENST00000561078 NACADO15069 1562 aa30.23■■■□□ 2.43
SPG21-213ENST00000561078 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
SPG21-213ENST00000561078 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
SPG21-213ENST00000561078 ZCCHC6Q5VYS8 1495 aaKnown RBP29.86■■■□□ 2.37
SPG21-213ENST00000561078 DCAF1Q9Y4B6 1507 aa29.78■■■□□ 2.36
SPG21-213ENST00000561078 UNC13AQ9UPW8 1703 aa29.46■■■□□ 2.31
SPG21-213ENST00000561078 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
SPG21-213ENST00000561078 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
SPG21-213ENST00000561078 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.27
SPG21-213ENST00000561078 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
SPG21-213ENST00000561078 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
SPG21-213ENST00000561078 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
SPG21-213ENST00000561078 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
SPG21-213ENST00000561078 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
SPG21-213ENST00000561078 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
SPG21-213ENST00000561078 SMARCA4P51532 1647 aa27.89■■■□□ 2.05
SPG21-213ENST00000561078 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
SPG21-213ENST00000561078 ATAD2BQ9ULI0 1458 aa27.85■■■□□ 2.05
SPG21-213ENST00000561078 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
SPG21-213ENST00000561078 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
SPG21-213ENST00000561078 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
SPG21-213ENST00000561078 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.02
SPG21-213ENST00000561078 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
SPG21-213ENST00000561078 RSF1Q96T23 1441 aaPredicted RBP27.29■■□□□ 1.96
SPG21-213ENST00000561078 WIZO95785 1651 aa27.28■■□□□ 1.96
SPG21-213ENST00000561078 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
SPG21-213ENST00000561078 NESP48681 1621 aa27.2■■□□□ 1.94
SPG21-213ENST00000561078 LAMC3Q9Y6N6 1575 aa27.17■■□□□ 1.94
SPG21-213ENST00000561078 CUX2O14529 1486 aa27.09■■□□□ 1.93
SPG21-213ENST00000561078 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
SPG21-213ENST00000561078 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
SPG21-213ENST00000561078 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
SPG21-213ENST00000561078 CFTRP13569 1480 aa26.86■■□□□ 1.89
SPG21-213ENST00000561078 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
SPG21-213ENST00000561078 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
SPG21-213ENST00000561078 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
SPG21-213ENST00000561078 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
SPG21-213ENST00000561078 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
SPG21-213ENST00000561078 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
SPG21-213ENST00000561078 WDR62O43379 1518 aa26.64■■□□□ 1.86
SPG21-213ENST00000561078 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
SPG21-213ENST00000561078 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
SPG21-213ENST00000561078 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
SPG21-213ENST00000561078 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
SPG21-213ENST00000561078 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
SPG21-213ENST00000561078 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
SPG21-213ENST00000561078 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
SPG21-213ENST00000561078 IFT140Q96RY7 1462 aa26.19■■□□□ 1.78
SPG21-213ENST00000561078 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
SPG21-213ENST00000561078 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
SPG21-213ENST00000561078 TARBP1Q13395 1621 aaKnown RBP25.97■■□□□ 1.75
SPG21-213ENST00000561078 OSCARQ8IYS5 282 aa25.96■■□□□ 1.75
SPG21-213ENST00000561078 SOGA1O94964 1423 aa25.94■■□□□ 1.74
SPG21-213ENST00000561078 CUX1P39880 1505 aa25.94■■□□□ 1.74
SPG21-213ENST00000561078 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
SPG21-213ENST00000561078 EIF4G3O43432 1585 aaKnown RBP25.89■■□□□ 1.73
SPG21-213ENST00000561078 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
SPG21-213ENST00000561078 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.73
SPG21-213ENST00000561078 WDR97A6NE52 1622 aa25.83■■□□□ 1.72
SPG21-213ENST00000561078 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
SPG21-213ENST00000561078 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
SPG21-213ENST00000561078 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
SPG21-213ENST00000561078 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
SPG21-213ENST00000561078 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
SPG21-213ENST00000561078 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
SPG21-213ENST00000561078 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
SPG21-213ENST00000561078 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
SPG21-213ENST00000561078 FBLN2P98095 1184 aa25.61■■□□□ 1.69
SPG21-213ENST00000561078 SNAPC4Q5SXM2 1469 aa25.61■■□□□ 1.69
SPG21-213ENST00000561078 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
SPG21-213ENST00000561078 CHD1O14646 1710 aa25.57■■□□□ 1.68
SPG21-213ENST00000561078 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
SPG21-213ENST00000561078 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
SPG21-213ENST00000561078 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
SPG21-213ENST00000561078 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
SPG21-213ENST00000561078 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
SPG21-213ENST00000561078 ARHGEF11O15085 1522 aa25.44■■□□□ 1.66
SPG21-213ENST00000561078 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
SPG21-213ENST00000561078 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
SPG21-213ENST00000561078 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
SPG21-213ENST00000561078 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
SPG21-213ENST00000561078 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
SPG21-213ENST00000561078 FHAD1B1AJZ9 1412 aa25.34■■□□□ 1.65
SPG21-213ENST00000561078 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
SPG21-213ENST00000561078 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
SPG21-213ENST00000561078 CYB5RLQ6IPT4 315 aa25.26■■□□□ 1.63
SPG21-213ENST00000561078 NUP160Q12769 1436 aa25.24■■□□□ 1.63
SPG21-213ENST00000561078 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
SPG21-213ENST00000561078 ARAP1Q96P48 1450 aa25.22■■□□□ 1.63
SPG21-213ENST00000561078 IGF1RP08069 1367 aa25.18■■□□□ 1.62
SPG21-213ENST00000561078 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
SPG21-213ENST00000561078 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
SPG21-213ENST00000561078 CUL7Q14999 1698 aa25.06■■□□□ 1.6
SPG21-213ENST00000561078 SHROOM2Q13796 1616 aa25.03■■□□□ 1.6
SPG21-213ENST00000561078 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
SPG21-213ENST00000561078 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms