RNA–Protein interactions for RNA: ENST00000560954.5

USP8-214, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-214ENST00000560954 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
USP8-214ENST00000560954 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
USP8-214ENST00000560954 ABCC9O60706 1549 aa26.8■■□□□ 1.88
USP8-214ENST00000560954 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
USP8-214ENST00000560954 NACADO15069 1562 aa25.87■■□□□ 1.73
USP8-214ENST00000560954 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
USP8-214ENST00000560954 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
USP8-214ENST00000560954 DCAF1Q9Y4B6 1507 aa25.6■■□□□ 1.69
USP8-214ENST00000560954 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
USP8-214ENST00000560954 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
USP8-214ENST00000560954 BICRAQ9NZM4 1560 aa25.16■■□□□ 1.62
USP8-214ENST00000560954 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
USP8-214ENST00000560954 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
USP8-214ENST00000560954 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
USP8-214ENST00000560954 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
USP8-214ENST00000560954 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
USP8-214ENST00000560954 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
USP8-214ENST00000560954 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
USP8-214ENST00000560954 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
USP8-214ENST00000560954 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
USP8-214ENST00000560954 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
USP8-214ENST00000560954 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
USP8-214ENST00000560954 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
USP8-214ENST00000560954 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
USP8-214ENST00000560954 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
USP8-214ENST00000560954 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
USP8-214ENST00000560954 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
USP8-214ENST00000560954 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
USP8-214ENST00000560954 WIZO95785 1651 aa23.45■■□□□ 1.34
USP8-214ENST00000560954 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
USP8-214ENST00000560954 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
USP8-214ENST00000560954 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
USP8-214ENST00000560954 NESP48681 1621 aa23.19■■□□□ 1.3
USP8-214ENST00000560954 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
USP8-214ENST00000560954 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
USP8-214ENST00000560954 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
USP8-214ENST00000560954 CUX2O14529 1486 aa23.05■■□□□ 1.28
USP8-214ENST00000560954 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
USP8-214ENST00000560954 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
USP8-214ENST00000560954 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
USP8-214ENST00000560954 CFTRP13569 1480 aa22.95■■□□□ 1.26
USP8-214ENST00000560954 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
USP8-214ENST00000560954 WDR62O43379 1518 aa22.82■■□□□ 1.24
USP8-214ENST00000560954 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
USP8-214ENST00000560954 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
USP8-214ENST00000560954 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
USP8-214ENST00000560954 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
USP8-214ENST00000560954 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
USP8-214ENST00000560954 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
USP8-214ENST00000560954 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
USP8-214ENST00000560954 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
USP8-214ENST00000560954 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
USP8-214ENST00000560954 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
USP8-214ENST00000560954 DNAJC5Q9H3Z4 198 aa22.29■■□□□ 1.16
USP8-214ENST00000560954 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
USP8-214ENST00000560954 CUX1P39880 1505 aa22.25■■□□□ 1.15
USP8-214ENST00000560954 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
USP8-214ENST00000560954 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
USP8-214ENST00000560954 ZNF608Q9ULD9 1512 aaPredicted RBP22.2■■□□□ 1.14
USP8-214ENST00000560954 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
USP8-214ENST00000560954 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
USP8-214ENST00000560954 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
USP8-214ENST00000560954 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
USP8-214ENST00000560954 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
USP8-214ENST00000560954 SOGA1O94964 1423 aa22.06■■□□□ 1.12
USP8-214ENST00000560954 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
USP8-214ENST00000560954 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
USP8-214ENST00000560954 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
USP8-214ENST00000560954 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
USP8-214ENST00000560954 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.115e-9■■□□□ 13.1
USP8-214ENST00000560954 CHD1O14646 1710 aa21.98■■□□□ 1.11
USP8-214ENST00000560954 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
USP8-214ENST00000560954 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
USP8-214ENST00000560954 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
USP8-214ENST00000560954 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
USP8-214ENST00000560954 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
USP8-214ENST00000560954 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
USP8-214ENST00000560954 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
USP8-214ENST00000560954 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
USP8-214ENST00000560954 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
USP8-214ENST00000560954 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
USP8-214ENST00000560954 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
USP8-214ENST00000560954 RIMBP3CA6NJZ7 1639 aa21.72■■□□□ 1.07
USP8-214ENST00000560954 RIMBP3BA6NNM3 1639 aa21.72■■□□□ 1.07
USP8-214ENST00000560954 RIMBP3Q9UFD9 1639 aa21.72■■□□□ 1.07
USP8-214ENST00000560954 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
USP8-214ENST00000560954 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
USP8-214ENST00000560954 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
USP8-214ENST00000560954 CUL7Q14999 1698 aa21.59■■□□□ 1.05
USP8-214ENST00000560954 NUP160Q12769 1436 aa21.58■■□□□ 1.05
USP8-214ENST00000560954 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
USP8-214ENST00000560954 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
USP8-214ENST00000560954 FBLN2P98095 1184 aa21.55■■□□□ 1.04
USP8-214ENST00000560954 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
USP8-214ENST00000560954 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
USP8-214ENST00000560954 ARAP1Q96P48 1450 aa21.5■■□□□ 1.03
USP8-214ENST00000560954 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
USP8-214ENST00000560954 IGF1RP08069 1367 aa21.43■■□□□ 1.02
USP8-214ENST00000560954 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
USP8-214ENST00000560954 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms