RNA–Protein interactions for RNA: ENST00000560850.1

MRPS11-210, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-210ENST00000560850 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
MRPS11-210ENST00000560850 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
MRPS11-210ENST00000560850 ABCC9O60706 1549 aa31.2■■■□□ 2.59
MRPS11-210ENST00000560850 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
MRPS11-210ENST00000560850 NACADO15069 1562 aa30.03■■■□□ 2.4
MRPS11-210ENST00000560850 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
MRPS11-210ENST00000560850 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
MRPS11-210ENST00000560850 DCAF8L2P0C7V8 631 aa29.8■■■□□ 2.36
MRPS11-210ENST00000560850 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
MRPS11-210ENST00000560850 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
MRPS11-210ENST00000560850 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
MRPS11-210ENST00000560850 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
MRPS11-210ENST00000560850 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
MRPS11-210ENST00000560850 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
MRPS11-210ENST00000560850 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
MRPS11-210ENST00000560850 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
MRPS11-210ENST00000560850 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.14
MRPS11-210ENST00000560850 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
MRPS11-210ENST00000560850 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
MRPS11-210ENST00000560850 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
MRPS11-210ENST00000560850 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
MRPS11-210ENST00000560850 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
MRPS11-210ENST00000560850 NCAPD3P42695 1498 aa27.67■■■□□ 2.02
MRPS11-210ENST00000560850 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
MRPS11-210ENST00000560850 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
MRPS11-210ENST00000560850 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
MRPS11-210ENST00000560850 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
MRPS11-210ENST00000560850 BAZ1BQ9UIG0 1483 aaKnown RBP27.45■■□□□ 1.99
MRPS11-210ENST00000560850 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
MRPS11-210ENST00000560850 WIZO95785 1651 aa27.3■■□□□ 1.96
MRPS11-210ENST00000560850 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
MRPS11-210ENST00000560850 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
MRPS11-210ENST00000560850 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
MRPS11-210ENST00000560850 NESP48681 1621 aa26.98■■□□□ 1.91
MRPS11-210ENST00000560850 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
MRPS11-210ENST00000560850 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
MRPS11-210ENST00000560850 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
MRPS11-210ENST00000560850 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
MRPS11-210ENST00000560850 CUX2O14529 1486 aa26.71■■□□□ 1.87
MRPS11-210ENST00000560850 CFTRP13569 1480 aa26.69■■□□□ 1.86
MRPS11-210ENST00000560850 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
MRPS11-210ENST00000560850 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
MRPS11-210ENST00000560850 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
MRPS11-210ENST00000560850 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
MRPS11-210ENST00000560850 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
MRPS11-210ENST00000560850 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
MRPS11-210ENST00000560850 WDR62O43379 1518 aa26.45■■□□□ 1.83
MRPS11-210ENST00000560850 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
MRPS11-210ENST00000560850 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
MRPS11-210ENST00000560850 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
MRPS11-210ENST00000560850 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
MRPS11-210ENST00000560850 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
MRPS11-210ENST00000560850 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
MRPS11-210ENST00000560850 CUX1P39880 1505 aa25.9■■□□□ 1.74
MRPS11-210ENST00000560850 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
MRPS11-210ENST00000560850 TARBP1Q13395 1621 aaKnown RBP25.87■■□□□ 1.73
MRPS11-210ENST00000560850 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
MRPS11-210ENST00000560850 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
MRPS11-210ENST00000560850 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
MRPS11-210ENST00000560850 EIF4G3O43432 1585 aaKnown RBP25.8■■□□□ 1.72
MRPS11-210ENST00000560850 RAD54L2Q9Y4B4 1467 aa25.74■■□□□ 1.71
MRPS11-210ENST00000560850 SOGA1O94964 1423 aa25.74■■□□□ 1.71
MRPS11-210ENST00000560850 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
MRPS11-210ENST00000560850 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
MRPS11-210ENST00000560850 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
MRPS11-210ENST00000560850 TOP2BQ02880 1626 aa25.7■■□□□ 1.7
MRPS11-210ENST00000560850 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
MRPS11-210ENST00000560850 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.7
MRPS11-210ENST00000560850 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
MRPS11-210ENST00000560850 TDRD9Q8NDG6 1382 aaKnown RBP25.58■■□□□ 1.69
MRPS11-210ENST00000560850 ABCA5Q8WWZ7 1642 aa25.52■■□□□ 1.68
MRPS11-210ENST00000560850 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
MRPS11-210ENST00000560850 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
MRPS11-210ENST00000560850 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
MRPS11-210ENST00000560850 CHD1O14646 1710 aa25.49■■□□□ 1.67
MRPS11-210ENST00000560850 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
MRPS11-210ENST00000560850 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
MRPS11-210ENST00000560850 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
MRPS11-210ENST00000560850 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
MRPS11-210ENST00000560850 FBLN2P98095 1184 aa25.31■■□□□ 1.64
MRPS11-210ENST00000560850 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
MRPS11-210ENST00000560850 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
MRPS11-210ENST00000560850 CHMP7Q8WUX9 453 aaPredicted RBP25.26■■□□□ 1.63
MRPS11-210ENST00000560850 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
MRPS11-210ENST00000560850 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
MRPS11-210ENST00000560850 GRIN2AQ12879 1464 aa25.18■■□□□ 1.62
MRPS11-210ENST00000560850 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
MRPS11-210ENST00000560850 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
MRPS11-210ENST00000560850 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
MRPS11-210ENST00000560850 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
MRPS11-210ENST00000560850 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
MRPS11-210ENST00000560850 CUL7Q14999 1698 aa25.09■■□□□ 1.61
MRPS11-210ENST00000560850 NUP160Q12769 1436 aa25.07■■□□□ 1.6
MRPS11-210ENST00000560850 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
MRPS11-210ENST00000560850 IGF1RP08069 1367 aa25.04■■□□□ 1.6
MRPS11-210ENST00000560850 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
MRPS11-210ENST00000560850 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
MRPS11-210ENST00000560850 SHROOM2Q13796 1616 aa24.93■■□□□ 1.58
MRPS11-210ENST00000560850 RUSC2Q8N2Y8 1516 aa24.92■■□□□ 1.58
MRPS11-210ENST00000560850 CARMIL1Q5VZK9 1371 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms