RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
CPNE6-218ENST00000560845 ABCC9O60706 1549 aa17.42■□□□□ 0.38
CPNE6-218ENST00000560845 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
CPNE6-218ENST00000560845 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
CPNE6-218ENST00000560845 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
CPNE6-218ENST00000560845 NACADO15069 1562 aa16.34■□□□□ 0.21
CPNE6-218ENST00000560845 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
CPNE6-218ENST00000560845 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
CPNE6-218ENST00000560845 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
CPNE6-218ENST00000560845 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
CPNE6-218ENST00000560845 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
CPNE6-218ENST00000560845 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
CPNE6-218ENST00000560845 SHROOM4Q9ULL8 1493 aa15.82■□□□□ 0.12
CPNE6-218ENST00000560845 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
CPNE6-218ENST00000560845 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
CPNE6-218ENST00000560845 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
CPNE6-218ENST00000560845 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
CPNE6-218ENST00000560845 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
CPNE6-218ENST00000560845 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
CPNE6-218ENST00000560845 CUX2O14529 1486 aa15.1■□□□□ 0.01
CPNE6-218ENST00000560845 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
CPNE6-218ENST00000560845 ERCC6Q03468 1493 aa15.07■□□□□ 0
CPNE6-218ENST00000560845 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
CPNE6-218ENST00000560845 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
CPNE6-218ENST00000560845 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
CPNE6-218ENST00000560845 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
CPNE6-218ENST00000560845 NESP48681 1621 aa14.92□□□□□ -0.02
CPNE6-218ENST00000560845 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
CPNE6-218ENST00000560845 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
CPNE6-218ENST00000560845 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
CPNE6-218ENST00000560845 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
CPNE6-218ENST00000560845 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
CPNE6-218ENST00000560845 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
CPNE6-218ENST00000560845 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.05
CPNE6-218ENST00000560845 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
CPNE6-218ENST00000560845 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
CPNE6-218ENST00000560845 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
CPNE6-218ENST00000560845 WDR62O43379 1518 aa14.57□□□□□ -0.08
CPNE6-218ENST00000560845 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
CPNE6-218ENST00000560845 WIZO95785 1651 aa14.52□□□□□ -0.08
CPNE6-218ENST00000560845 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
CPNE6-218ENST00000560845 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
CPNE6-218ENST00000560845 CFTRP13569 1480 aa14.43□□□□□ -0.1
CPNE6-218ENST00000560845 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
CPNE6-218ENST00000560845 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
CPNE6-218ENST00000560845 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
CPNE6-218ENST00000560845 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
CPNE6-218ENST00000560845 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
CPNE6-218ENST00000560845 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
CPNE6-218ENST00000560845 ZNF608Q9ULD9 1512 aaPredicted RBP14.21□□□□□ -0.13
CPNE6-218ENST00000560845 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
CPNE6-218ENST00000560845 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
CPNE6-218ENST00000560845 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
CPNE6-218ENST00000560845 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
CPNE6-218ENST00000560845 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
CPNE6-218ENST00000560845 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
CPNE6-218ENST00000560845 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
CPNE6-218ENST00000560845 EIF4G3O43432 1585 aaKnown RBP14.12□□□□□ -0.15
CPNE6-218ENST00000560845 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
CPNE6-218ENST00000560845 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
CPNE6-218ENST00000560845 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPNE6-218ENST00000560845 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
CPNE6-218ENST00000560845 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
CPNE6-218ENST00000560845 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
CPNE6-218ENST00000560845 CHD1O14646 1710 aa14.01□□□□□ -0.17
CPNE6-218ENST00000560845 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
CPNE6-218ENST00000560845 FBLN2P98095 1184 aa13.99□□□□□ -0.17
CPNE6-218ENST00000560845 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
CPNE6-218ENST00000560845 SOGA1O94964 1423 aa13.94□□□□□ -0.18
CPNE6-218ENST00000560845 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
CPNE6-218ENST00000560845 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
CPNE6-218ENST00000560845 SNAPC4Q5SXM2 1469 aa13.93□□□□□ -0.18
CPNE6-218ENST00000560845 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
CPNE6-218ENST00000560845 WDR97A6NE52 1622 aa13.9□□□□□ -0.19
CPNE6-218ENST00000560845 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.19
CPNE6-218ENST00000560845 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
CPNE6-218ENST00000560845 CUX1P39880 1505 aa13.86□□□□□ -0.19
CPNE6-218ENST00000560845 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
CPNE6-218ENST00000560845 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
CPNE6-218ENST00000560845 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
CPNE6-218ENST00000560845 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
CPNE6-218ENST00000560845 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
CPNE6-218ENST00000560845 PBRM1Q86U86 1689 aa13.75□□□□□ -0.21
CPNE6-218ENST00000560845 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
CPNE6-218ENST00000560845 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
CPNE6-218ENST00000560845 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
CPNE6-218ENST00000560845 AEBP2Q6ZN18 517 aaPredicted RBP13.66□□□□□ -0.22
CPNE6-218ENST00000560845 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
CPNE6-218ENST00000560845 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
CPNE6-218ENST00000560845 NUP160Q12769 1436 aa13.64□□□□□ -0.23
CPNE6-218ENST00000560845 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
CPNE6-218ENST00000560845 CHIC1Q5VXU3 224 aa13.63□□□□□ -0.23
CPNE6-218ENST00000560845 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
CPNE6-218ENST00000560845 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
CPNE6-218ENST00000560845 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
CPNE6-218ENST00000560845 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
CPNE6-218ENST00000560845 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
CPNE6-218ENST00000560845 ERICH3Q5RHP9 1530 aa13.55□□□□□ -0.24
CPNE6-218ENST00000560845 PRG4Q92954 1404 aaPredicted RBP13.51□□□□□ -0.25
CPNE6-218ENST00000560845 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms