RNA–Protein interactions for RNA: ENST00000560762.5

NIPA2-209, Transcript of NIPA magnesium transporter 2, human

TSL 5

Gene NIPA2, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-209	ENST00000560762	NISCH	Q9Y2I1	1504 aa		53.27	■■■■■ 6.12
NIPA2-209	ENST00000560762	CCDC180	Q9P1Z9	1646 aa		47.3	■■■■■ 5.16
NIPA2-209	ENST00000560762	ABCC9	O60706	1549 aa		46.24	■■■■■ 4.99
NIPA2-209	ENST00000560762	RB1CC1	Q8TDY2	1594 aa		44.5	■■■■■ 4.71
NIPA2-209	ENST00000560762	NACAD	O15069	1562 aa		44.48	■■■■■ 4.71
NIPA2-209	ENST00000560762	DCAF8L2	P0C7V8	631 aa		44.41	■■■■■ 4.7
NIPA2-209	ENST00000560762	ZCCHC6	Q5VYS8	1495 aa	Known RBP	44.4	■■■■■ 4.7
NIPA2-209	ENST00000560762	MYO15B	Q96JP2	1530 aa		44.26	■■■■■ 4.68
NIPA2-209	ENST00000560762	DCAF1	Q9Y4B6	1507 aa		44.09	■■■■■ 4.65
NIPA2-209	ENST00000560762	UNC13A	Q9UPW8	1703 aa		43.48	■■■■■ 4.55
NIPA2-209	ENST00000560762	PABPN1	Q86U42	306 aa	Known RBP eCLIP	43.22	■■■■■ 4.51
NIPA2-209	ENST00000560762	BICRA	Q9NZM4	1560 aa		43.19	■■■■■ 4.5
NIPA2-209	ENST00000560762	SCRIB	Q14160	1630 aa		43.16	■■■■■ 4.5
NIPA2-209	ENST00000560762	SHROOM4	Q9ULL8	1493 aa		42.74	■■■■■ 4.43
NIPA2-209	ENST00000560762	DNAJC5B	Q9UF47	199 aa		42.42	■■■■■ 4.38
NIPA2-209	ENST00000560762	EIF4G1	Q04637	1599 aa	Known RBP	42.02	■■■■■ 4.32
NIPA2-209	ENST00000560762	CC2D2A	Q9P2K1	1620 aa		41.83	■■■■■ 4.29
NIPA2-209	ENST00000560762	CECR2	Q9BXF3	1484 aa		41.54	■■■■■ 4.24
NIPA2-209	ENST00000560762	SMARCA4	P51532	1647 aa		41.3	■■■■■ 4.2
NIPA2-209	ENST00000560762	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	41.27	■■■■■ 4.2
NIPA2-209	ENST00000560762	ATAD2B	Q9ULI0	1458 aa		41.09	■■■■■ 4.17
NIPA2-209	ENST00000560762	NCAPD3	P42695	1498 aa		41.06	■■■■■ 4.16
NIPA2-209	ENST00000560762	MROH2B	Q7Z745	1585 aa		41.06	■■■■■ 4.16
NIPA2-209	ENST00000560762	SMARCA2	P51531	1590 aa		41.02	■■■■■ 4.16
NIPA2-209	ENST00000560762	PEG3	Q9GZU2	1588 aa		40.93	■■■■■ 4.14
NIPA2-209	ENST00000560762	HMGXB3	Q12766	1538 aa		40.85	■■■■■ 4.13
NIPA2-209	ENST00000560762	BAZ1B	Q9UIG0	1483 aa	Known RBP	40.73	■■■■■ 4.11
NIPA2-209	ENST00000560762	RSF1	Q96T23	1441 aa	Predicted RBP	40.62	■■■■■ 4.09
NIPA2-209	ENST00000560762	WIZ	O95785	1651 aa		40.59	■■■■■ 4.09
NIPA2-209	ENST00000560762	TOP2A	P11388	1531 aa	Known RBP	40.18	■■■■■ 4.02
NIPA2-209	ENST00000560762	NES	P48681	1621 aa		40.04	■■■■■ 4
NIPA2-209	ENST00000560762	LAMC3	Q9Y6N6	1575 aa		39.94	■■■■□ 3.98
NIPA2-209	ENST00000560762	CADPS	Q9ULU8	1353 aa		39.85	■■■■□ 3.97
NIPA2-209	ENST00000560762	ERCC6	Q03468	1493 aa		39.83	■■■■□ 3.97
NIPA2-209	ENST00000560762	CCDC88B	A6NC98	1476 aa		39.71	■■■■□ 3.95
NIPA2-209	ENST00000560762	PDS5B	Q9NTI5	1447 aa		39.67	■■■■□ 3.94
NIPA2-209	ENST00000560762	CFTR	P13569	1480 aa		39.64	■■■■□ 3.94
NIPA2-209	ENST00000560762	SUPT5H	O00267	1087 aa	Known RBP	39.58	■■■■□ 3.93
NIPA2-209	ENST00000560762	KIF21A	Q7Z4S6	1674 aa		39.54	■■■■□ 3.92
NIPA2-209	ENST00000560762	THOC2	Q8NI27	1593 aa	Known RBP	39.42	■■■■□ 3.9
NIPA2-209	ENST00000560762	CUX2	O14529	1486 aa		39.42	■■■■□ 3.9
NIPA2-209	ENST00000560762	FANCD2	Q9BXW9	1451 aa		39.4	■■■■□ 3.9
NIPA2-209	ENST00000560762	CEP164	Q9UPV0	1460 aa		39.33	■■■■□ 3.89
NIPA2-209	ENST00000560762	PRDM2	Q13029	1718 aa		39.28	■■■■□ 3.88
NIPA2-209	ENST00000560762	MRC2	Q9UBG0	1479 aa		39.27	■■■■□ 3.88
NIPA2-209	ENST00000560762	WDR62	O43379	1518 aa		39.14	■■■■□ 3.86
NIPA2-209	ENST00000560762	URB2	Q14146	1524 aa	Known RBP	39.01	■■■■□ 3.84
NIPA2-209	ENST00000560762	TOPBP1	Q92547	1522 aa		38.78	■■■■□ 3.8
NIPA2-209	ENST00000560762	ABCC8	Q09428	1581 aa		38.76	■■■■□ 3.8
NIPA2-209	ENST00000560762	DNMBP	Q6XZF7	1577 aa		38.73	■■■■□ 3.79
NIPA2-209	ENST00000560762	IFT140	Q96RY7	1462 aa		38.51	■■■■□ 3.76
NIPA2-209	ENST00000560762	CUX1	P39880	1505 aa		38.51	■■■■□ 3.76
NIPA2-209	ENST00000560762	POLA1	P09884	1462 aa	Predicted RBP	38.46	■■■■□ 3.75
NIPA2-209	ENST00000560762	FGD5	Q6ZNL6	1462 aa		38.36	■■■■□ 3.73
NIPA2-209	ENST00000560762	TARBP1	Q13395	1621 aa	Known RBP	38.35	■■■■□ 3.73
NIPA2-209	ENST00000560762	ZNF608	Q9ULD9	1512 aa	Predicted RBP	38.34	■■■■□ 3.73
NIPA2-209	ENST00000560762	SOGA1	O94964	1423 aa		38.29	■■■■□ 3.72
NIPA2-209	ENST00000560762	WRN	Q14191	1432 aa	Predicted RBP eCLIP	38.28	■■■■□ 3.72
NIPA2-209	ENST00000560762	RAD54L2	Q9Y4B4	1467 aa		38.28	■■■■□ 3.72
NIPA2-209	ENST00000560762	TOP2B	Q02880	1626 aa		38.19	■■■■□ 3.7
NIPA2-209	ENST00000560762	SYNJ1	O43426	1573 aa		38.18	■■■■□ 3.7
NIPA2-209	ENST00000560762	EIF4G3	O43432	1585 aa	Known RBP	38.18	■■■■□ 3.7
NIPA2-209	ENST00000560762	BIVM-ERCC5	R4GMW8	1640 aa		38.17	■■■■□ 3.7
NIPA2-209	ENST00000560762	DNAJC5	Q9H3Z4	198 aa		38.14	■■■■□ 3.7
NIPA2-209	ENST00000560762	AQR	O60306	1485 aa	Known RBP eCLIP	38.12	■■■■□ 3.69
NIPA2-209	ENST00000560762	TDRD9	Q8NDG6	1382 aa	Known RBP	38.06	■■■■□ 3.68
NIPA2-209	ENST00000560762	WDR97	A6NE52	1622 aa		38.04	■■■■□ 3.68
NIPA2-209	ENST00000560762	ABCA10	Q8WWZ4	1543 aa		38.01	■■■■□ 3.67
NIPA2-209	ENST00000560762	GAPVD1	Q14C86	1478 aa		37.84	■■■■□ 3.65
NIPA2-209	ENST00000560762	ABCA5	Q8WWZ7	1642 aa		37.84	■■■■□ 3.65
NIPA2-209	ENST00000560762	GRIN2B	Q13224	1484 aa		37.84	■■■■□ 3.65
NIPA2-209	ENST00000560762	OSCAR	Q8IYS5	282 aa		37.78	■■■■□ 3.64
NIPA2-209	ENST00000560762	SNAPC4	Q5SXM2	1469 aa		37.77	■■■■□ 3.64
NIPA2-209	ENST00000560762	PBRM1	Q86U86	1689 aa		37.73	■■■■□ 3.63
NIPA2-209	ENST00000560762	MAGI1	Q96QZ7	1491 aa	Predicted RBP	37.73	■■■■□ 3.63
NIPA2-209	ENST00000560762	CHD1	O14646	1710 aa		37.66	■■■■□ 3.62
NIPA2-209	ENST00000560762	FBLN2	P98095	1184 aa		37.62	■■■■□ 3.61
NIPA2-209	ENST00000560762	SYNJ2	O15056	1496 aa		37.58	■■■■□ 3.61
NIPA2-209	ENST00000560762	CHMP7	Q8WUX9	453 aa	Predicted RBP	37.54	■■■■□ 3.6
NIPA2-209	ENST00000560762	ERICH3	Q5RHP9	1530 aa		37.54	■■■■□ 3.6
NIPA2-209	ENST00000560762	ADAMTS12	P58397	1594 aa		37.47	■■■■□ 3.59
NIPA2-209	ENST00000560762	KIF27	Q86VH2	1401 aa		37.46	■■■■□ 3.59
NIPA2-209	ENST00000560762	FHAD1	B1AJZ9	1412 aa		37.42	■■■■□ 3.58
NIPA2-209	ENST00000560762	TRIM41	Q8WV44	630 aa		37.38	■■■■□ 3.57
NIPA2-209	ENST00000560762	GRIN2A	Q12879	1464 aa		37.35	■■■■□ 3.57
NIPA2-209	ENST00000560762	IGF1R	P08069	1367 aa		37.33	■■■■□ 3.57
NIPA2-209	ENST00000560762	CLASP1	Q7Z460	1538 aa		37.3	■■■■□ 3.56
NIPA2-209	ENST00000560762	NUP160	Q12769	1436 aa		37.2	■■■■□ 3.55
NIPA2-209	ENST00000560762	CUL7	Q14999	1698 aa		37.19	■■■■□ 3.54
NIPA2-209	ENST00000560762	ARHGEF11	O15085	1522 aa		37.18	■■■■□ 3.54
NIPA2-209	ENST00000560762	CEP170	Q5SW79	1584 aa		37.17	■■■■□ 3.54
NIPA2-209	ENST00000560762	RIMBP3C	A6NJZ7	1639 aa		37.17	■■■■□ 3.54
NIPA2-209	ENST00000560762	RIMBP3B	A6NNM3	1639 aa		37.17	■■■■□ 3.54
NIPA2-209	ENST00000560762	RIMBP3	Q9UFD9	1639 aa		37.17	■■■■□ 3.54
NIPA2-209	ENST00000560762	RUSC2	Q8N2Y8	1516 aa		37.16	■■■■□ 3.54
NIPA2-209	ENST00000560762	CARMIL1	Q5VZK9	1371 aa		37.09	■■■■□ 3.53
NIPA2-209	ENST00000560762	CHIC1	Q5VXU3	224 aa		37	■■■■□ 3.51
NIPA2-209	ENST00000560762	ARAP1	Q96P48	1450 aa		36.9	■■■■□ 3.5
NIPA2-209	ENST00000560762	SHROOM2	Q13796	1616 aa		36.9	■■■■□ 3.5
NIPA2-209	ENST00000560762	RAPGEF2	Q9Y4G8	1499 aa		36.88	■■■■□ 3.49

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