RNA–Protein interactions for RNA: ENST00000560762.5

NIPA2-209, Transcript of NIPA magnesium transporter 2, humanhuman

TSL 5

Gene NIPA2, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-209ENST00000560762 NISCHQ9Y2I1 1504 aa53.27■■■■■ 6.12
NIPA2-209ENST00000560762 CCDC180Q9P1Z9 1646 aa47.3■■■■■ 5.16
NIPA2-209ENST00000560762 ABCC9O60706 1549 aa46.24■■■■■ 4.99
NIPA2-209ENST00000560762 RB1CC1Q8TDY2 1594 aa44.5■■■■■ 4.71
NIPA2-209ENST00000560762 NACADO15069 1562 aa44.48■■■■■ 4.71
NIPA2-209ENST00000560762 DCAF8L2P0C7V8 631 aa44.41■■■■■ 4.7
NIPA2-209ENST00000560762 ZCCHC6Q5VYS8 1495 aaKnown RBP44.4■■■■■ 4.7
NIPA2-209ENST00000560762 MYO15BQ96JP2 1530 aa44.26■■■■■ 4.68
NIPA2-209ENST00000560762 DCAF1Q9Y4B6 1507 aa44.09■■■■■ 4.65
NIPA2-209ENST00000560762 UNC13AQ9UPW8 1703 aa43.48■■■■■ 4.55
NIPA2-209ENST00000560762 PABPN1Q86U42 306 aaKnown RBP eCLIP43.22■■■■■ 4.51
NIPA2-209ENST00000560762 BICRAQ9NZM4 1560 aa43.19■■■■■ 4.5
NIPA2-209ENST00000560762 SCRIBQ14160 1630 aa43.16■■■■■ 4.5
NIPA2-209ENST00000560762 SHROOM4Q9ULL8 1493 aa42.74■■■■■ 4.43
NIPA2-209ENST00000560762 DNAJC5BQ9UF47 199 aa42.42■■■■■ 4.38
NIPA2-209ENST00000560762 EIF4G1Q04637 1599 aaKnown RBP42.02■■■■■ 4.32
NIPA2-209ENST00000560762 CC2D2AQ9P2K1 1620 aa41.83■■■■■ 4.29
NIPA2-209ENST00000560762 CECR2Q9BXF3 1484 aa41.54■■■■■ 4.24
NIPA2-209ENST00000560762 SMARCA4P51532 1647 aa41.3■■■■■ 4.2
NIPA2-209ENST00000560762 BAZ1AQ9NRL2 1556 aaPredicted RBP41.27■■■■■ 4.2
NIPA2-209ENST00000560762 ATAD2BQ9ULI0 1458 aa41.09■■■■■ 4.17
NIPA2-209ENST00000560762 NCAPD3P42695 1498 aa41.06■■■■■ 4.16
NIPA2-209ENST00000560762 MROH2BQ7Z745 1585 aa41.06■■■■■ 4.16
NIPA2-209ENST00000560762 SMARCA2P51531 1590 aa41.02■■■■■ 4.16
NIPA2-209ENST00000560762 PEG3Q9GZU2 1588 aa40.93■■■■■ 4.14
NIPA2-209ENST00000560762 HMGXB3Q12766 1538 aa40.85■■■■■ 4.13
NIPA2-209ENST00000560762 BAZ1BQ9UIG0 1483 aaKnown RBP40.73■■■■■ 4.11
NIPA2-209ENST00000560762 RSF1Q96T23 1441 aaPredicted RBP40.62■■■■■ 4.09
NIPA2-209ENST00000560762 WIZO95785 1651 aa40.59■■■■■ 4.09
NIPA2-209ENST00000560762 TOP2AP11388 1531 aaKnown RBP40.18■■■■■ 4.02
NIPA2-209ENST00000560762 NESP48681 1621 aa40.04■■■■■ 4
NIPA2-209ENST00000560762 LAMC3Q9Y6N6 1575 aa39.94■■■■□ 3.98
NIPA2-209ENST00000560762 CADPSQ9ULU8 1353 aa39.85■■■■□ 3.97
NIPA2-209ENST00000560762 ERCC6Q03468 1493 aa39.83■■■■□ 3.97
NIPA2-209ENST00000560762 CCDC88BA6NC98 1476 aa39.71■■■■□ 3.95
NIPA2-209ENST00000560762 PDS5BQ9NTI5 1447 aa39.67■■■■□ 3.94
NIPA2-209ENST00000560762 CFTRP13569 1480 aa39.64■■■■□ 3.94
NIPA2-209ENST00000560762 SUPT5HO00267 1087 aaKnown RBP39.58■■■■□ 3.93
NIPA2-209ENST00000560762 KIF21AQ7Z4S6 1674 aa39.54■■■■□ 3.92
NIPA2-209ENST00000560762 THOC2Q8NI27 1593 aaKnown RBP39.42■■■■□ 3.9
NIPA2-209ENST00000560762 CUX2O14529 1486 aa39.42■■■■□ 3.9
NIPA2-209ENST00000560762 FANCD2Q9BXW9 1451 aa39.4■■■■□ 3.9
NIPA2-209ENST00000560762 CEP164Q9UPV0 1460 aa39.33■■■■□ 3.89
NIPA2-209ENST00000560762 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
NIPA2-209ENST00000560762 MRC2Q9UBG0 1479 aa39.27■■■■□ 3.88
NIPA2-209ENST00000560762 WDR62O43379 1518 aa39.14■■■■□ 3.86
NIPA2-209ENST00000560762 URB2Q14146 1524 aaKnown RBP39.01■■■■□ 3.84
NIPA2-209ENST00000560762 TOPBP1Q92547 1522 aa38.78■■■■□ 3.8
NIPA2-209ENST00000560762 ABCC8Q09428 1581 aa38.76■■■■□ 3.8
NIPA2-209ENST00000560762 DNMBPQ6XZF7 1577 aa38.73■■■■□ 3.79
NIPA2-209ENST00000560762 IFT140Q96RY7 1462 aa38.51■■■■□ 3.76
NIPA2-209ENST00000560762 CUX1P39880 1505 aa38.51■■■■□ 3.76
NIPA2-209ENST00000560762 POLA1P09884 1462 aaPredicted RBP38.46■■■■□ 3.75
NIPA2-209ENST00000560762 FGD5Q6ZNL6 1462 aa38.36■■■■□ 3.73
NIPA2-209ENST00000560762 TARBP1Q13395 1621 aaKnown RBP38.35■■■■□ 3.73
NIPA2-209ENST00000560762 ZNF608Q9ULD9 1512 aaPredicted RBP38.34■■■■□ 3.73
NIPA2-209ENST00000560762 SOGA1O94964 1423 aa38.29■■■■□ 3.72
NIPA2-209ENST00000560762 WRNQ14191 1432 aaPredicted RBP eCLIP38.28■■■■□ 3.72
NIPA2-209ENST00000560762 RAD54L2Q9Y4B4 1467 aa38.28■■■■□ 3.72
NIPA2-209ENST00000560762 TOP2BQ02880 1626 aa38.19■■■■□ 3.7
NIPA2-209ENST00000560762 SYNJ1O43426 1573 aa38.18■■■■□ 3.7
NIPA2-209ENST00000560762 EIF4G3O43432 1585 aaKnown RBP38.18■■■■□ 3.7
NIPA2-209ENST00000560762 BIVM-ERCC5R4GMW8 1640 aa38.17■■■■□ 3.7
NIPA2-209ENST00000560762 DNAJC5Q9H3Z4 198 aa38.14■■■■□ 3.7
NIPA2-209ENST00000560762 AQRO60306 1485 aaKnown RBP eCLIP38.12■■■■□ 3.69
NIPA2-209ENST00000560762 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
NIPA2-209ENST00000560762 WDR97A6NE52 1622 aa38.04■■■■□ 3.68
NIPA2-209ENST00000560762 ABCA10Q8WWZ4 1543 aa38.01■■■■□ 3.67
NIPA2-209ENST00000560762 GAPVD1Q14C86 1478 aa37.84■■■■□ 3.65
NIPA2-209ENST00000560762 ABCA5Q8WWZ7 1642 aa37.84■■■■□ 3.65
NIPA2-209ENST00000560762 GRIN2BQ13224 1484 aa37.84■■■■□ 3.65
NIPA2-209ENST00000560762 OSCARQ8IYS5 282 aa37.78■■■■□ 3.64
NIPA2-209ENST00000560762 SNAPC4Q5SXM2 1469 aa37.77■■■■□ 3.64
NIPA2-209ENST00000560762 PBRM1Q86U86 1689 aa37.73■■■■□ 3.63
NIPA2-209ENST00000560762 MAGI1Q96QZ7 1491 aaPredicted RBP37.73■■■■□ 3.63
NIPA2-209ENST00000560762 CHD1O14646 1710 aa37.66■■■■□ 3.62
NIPA2-209ENST00000560762 FBLN2P98095 1184 aa37.62■■■■□ 3.61
NIPA2-209ENST00000560762 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
NIPA2-209ENST00000560762 CHMP7Q8WUX9 453 aaPredicted RBP37.54■■■■□ 3.6
NIPA2-209ENST00000560762 ERICH3Q5RHP9 1530 aa37.54■■■■□ 3.6
NIPA2-209ENST00000560762 ADAMTS12P58397 1594 aa37.47■■■■□ 3.59
NIPA2-209ENST00000560762 KIF27Q86VH2 1401 aa37.46■■■■□ 3.59
NIPA2-209ENST00000560762 FHAD1B1AJZ9 1412 aa37.42■■■■□ 3.58
NIPA2-209ENST00000560762 TRIM41Q8WV44 630 aa37.38■■■■□ 3.57
NIPA2-209ENST00000560762 GRIN2AQ12879 1464 aa37.35■■■■□ 3.57
NIPA2-209ENST00000560762 IGF1RP08069 1367 aa37.33■■■■□ 3.57
NIPA2-209ENST00000560762 CLASP1Q7Z460 1538 aa37.3■■■■□ 3.56
NIPA2-209ENST00000560762 NUP160Q12769 1436 aa37.2■■■■□ 3.55
NIPA2-209ENST00000560762 CUL7Q14999 1698 aa37.19■■■■□ 3.54
NIPA2-209ENST00000560762 ARHGEF11O15085 1522 aa37.18■■■■□ 3.54
NIPA2-209ENST00000560762 CEP170Q5SW79 1584 aa37.17■■■■□ 3.54
NIPA2-209ENST00000560762 RIMBP3CA6NJZ7 1639 aa37.17■■■■□ 3.54
NIPA2-209ENST00000560762 RIMBP3BA6NNM3 1639 aa37.17■■■■□ 3.54
NIPA2-209ENST00000560762 RIMBP3Q9UFD9 1639 aa37.17■■■■□ 3.54
NIPA2-209ENST00000560762 RUSC2Q8N2Y8 1516 aa37.16■■■■□ 3.54
NIPA2-209ENST00000560762 CARMIL1Q5VZK9 1371 aa37.09■■■■□ 3.53
NIPA2-209ENST00000560762 CHIC1Q5VXU3 224 aa37■■■■□ 3.51
NIPA2-209ENST00000560762 ARAP1Q96P48 1450 aa36.9■■■■□ 3.5
NIPA2-209ENST00000560762 SHROOM2Q13796 1616 aa36.9■■■■□ 3.5
NIPA2-209ENST00000560762 RAPGEF2Q9Y4G8 1499 aa36.88■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms