RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.08
MRPS11-209ENST00000560708 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
MRPS11-209ENST00000560708 ABCC9O60706 1549 aa30.57■■■□□ 2.49
MRPS11-209ENST00000560708 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
MRPS11-209ENST00000560708 NACADO15069 1562 aa28.96■■■□□ 2.23
MRPS11-209ENST00000560708 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
MRPS11-209ENST00000560708 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
MRPS11-209ENST00000560708 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
MRPS11-209ENST00000560708 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
MRPS11-209ENST00000560708 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
MRPS11-209ENST00000560708 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
MRPS11-209ENST00000560708 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
MRPS11-209ENST00000560708 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
MRPS11-209ENST00000560708 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
MRPS11-209ENST00000560708 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
MRPS11-209ENST00000560708 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
MRPS11-209ENST00000560708 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
MRPS11-209ENST00000560708 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
MRPS11-209ENST00000560708 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
MRPS11-209ENST00000560708 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
MRPS11-209ENST00000560708 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
MRPS11-209ENST00000560708 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
MRPS11-209ENST00000560708 BAZ1AQ9NRL2 1556 aaPredicted RBP26.59■■□□□ 1.85
MRPS11-209ENST00000560708 HMGXB3Q12766 1538 aa26.57■■□□□ 1.84
MRPS11-209ENST00000560708 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
MRPS11-209ENST00000560708 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
MRPS11-209ENST00000560708 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
MRPS11-209ENST00000560708 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
MRPS11-209ENST00000560708 NESP48681 1621 aa26.31■■□□□ 1.8
MRPS11-209ENST00000560708 CUX2O14529 1486 aa26.25■■□□□ 1.79
MRPS11-209ENST00000560708 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
MRPS11-209ENST00000560708 WIZO95785 1651 aa26.12■■□□□ 1.77
MRPS11-209ENST00000560708 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
MRPS11-209ENST00000560708 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
MRPS11-209ENST00000560708 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
MRPS11-209ENST00000560708 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
MRPS11-209ENST00000560708 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
MRPS11-209ENST00000560708 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
MRPS11-209ENST00000560708 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
MRPS11-209ENST00000560708 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
MRPS11-209ENST00000560708 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
MRPS11-209ENST00000560708 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
MRPS11-209ENST00000560708 CEP164Q9UPV0 1460 aa25.68■■□□□ 1.7
MRPS11-209ENST00000560708 WDR62O43379 1518 aa25.68■■□□□ 1.7
MRPS11-209ENST00000560708 CFTRP13569 1480 aa25.67■■□□□ 1.7
MRPS11-209ENST00000560708 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
MRPS11-209ENST00000560708 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
MRPS11-209ENST00000560708 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
MRPS11-209ENST00000560708 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
MRPS11-209ENST00000560708 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
MRPS11-209ENST00000560708 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
MRPS11-209ENST00000560708 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
MRPS11-209ENST00000560708 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
MRPS11-209ENST00000560708 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
MRPS11-209ENST00000560708 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
MRPS11-209ENST00000560708 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
MRPS11-209ENST00000560708 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
MRPS11-209ENST00000560708 TARBP1Q13395 1621 aaKnown RBP24.95■■□□□ 1.58
MRPS11-209ENST00000560708 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
MRPS11-209ENST00000560708 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
MRPS11-209ENST00000560708 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.57
MRPS11-209ENST00000560708 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
MRPS11-209ENST00000560708 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.56
MRPS11-209ENST00000560708 CUX1P39880 1505 aa24.82■■□□□ 1.56
MRPS11-209ENST00000560708 SOGA1O94964 1423 aa24.81■■□□□ 1.56
MRPS11-209ENST00000560708 CHD1O14646 1710 aa24.77■■□□□ 1.56
MRPS11-209ENST00000560708 RIMBP3CA6NJZ7 1639 aa24.76■■□□□ 1.55
MRPS11-209ENST00000560708 RIMBP3BA6NNM3 1639 aa24.76■■□□□ 1.55
MRPS11-209ENST00000560708 RIMBP3Q9UFD9 1639 aa24.76■■□□□ 1.55
MRPS11-209ENST00000560708 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
MRPS11-209ENST00000560708 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
MRPS11-209ENST00000560708 FBLN2P98095 1184 aa24.69■■□□□ 1.54
MRPS11-209ENST00000560708 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
MRPS11-209ENST00000560708 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
MRPS11-209ENST00000560708 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
MRPS11-209ENST00000560708 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
MRPS11-209ENST00000560708 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
MRPS11-209ENST00000560708 ABCA10Q8WWZ4 1543 aa24.53■■□□□ 1.52
MRPS11-209ENST00000560708 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
MRPS11-209ENST00000560708 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
MRPS11-209ENST00000560708 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
MRPS11-209ENST00000560708 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
MRPS11-209ENST00000560708 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
MRPS11-209ENST00000560708 CLASP1Q7Z460 1538 aa24.48■■□□□ 1.51
MRPS11-209ENST00000560708 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
MRPS11-209ENST00000560708 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
MRPS11-209ENST00000560708 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
MRPS11-209ENST00000560708 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
MRPS11-209ENST00000560708 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
MRPS11-209ENST00000560708 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
MRPS11-209ENST00000560708 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
MRPS11-209ENST00000560708 ERICH3Q5RHP9 1530 aa24.22■■□□□ 1.47
MRPS11-209ENST00000560708 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
MRPS11-209ENST00000560708 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
MRPS11-209ENST00000560708 NUP160Q12769 1436 aa24.18■■□□□ 1.46
MRPS11-209ENST00000560708 TRHP20396 242 aaPredicted RBP24.17■■□□□ 1.46
MRPS11-209ENST00000560708 ERCC6L2Q5T890 1561 aa24.13■■□□□ 1.45
MRPS11-209ENST00000560708 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
MRPS11-209ENST00000560708 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
MRPS11-209ENST00000560708 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms