RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 NISCHQ9Y2I1 1504 aa53.06■■■■■ 6.09
PIF1-208ENST00000560444 CCDC180Q9P1Z9 1646 aa46.07■■■■■ 4.97
PIF1-208ENST00000560444 ZCCHC6Q5VYS8 1495 aaKnown RBP44.62■■■■■ 4.73
PIF1-208ENST00000560444 ABCC9O60706 1549 aa44.04■■■■■ 4.64
PIF1-208ENST00000560444 DCAF1Q9Y4B6 1507 aa43.94■■■■■ 4.62
PIF1-208ENST00000560444 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
PIF1-208ENST00000560444 SHROOM4Q9ULL8 1493 aa43.42■■■■■ 4.54
PIF1-208ENST00000560444 MYO15BQ96JP2 1530 aa43.32■■■■■ 4.53
PIF1-208ENST00000560444 NACADO15069 1562 aa42.98■■■■■ 4.47
PIF1-208ENST00000560444 RB1CC1Q8TDY2 1594 aa42.75■■■■■ 4.43
PIF1-208ENST00000560444 SCRIBQ14160 1630 aa42.35■■■■■ 4.37
PIF1-208ENST00000560444 SUPT5HO00267 1087 aaKnown RBP42.01■■■■■ 4.32
PIF1-208ENST00000560444 UNC13AQ9UPW8 1703 aa41.84■■■■■ 4.29
PIF1-208ENST00000560444 BICRAQ9NZM4 1560 aa41.47■■■■■ 4.23
PIF1-208ENST00000560444 PABPN1Q86U42 306 aaKnown RBP eCLIP41.47■■■■■ 4.23
PIF1-208ENST00000560444 RSF1Q96T23 1441 aaPredicted RBP41.3■■■■■ 4.2
PIF1-208ENST00000560444 CECR2Q9BXF3 1484 aa41.16■■■■■ 4.18
PIF1-208ENST00000560444 MROH2BQ7Z745 1585 aa40.96■■■■■ 4.15
PIF1-208ENST00000560444 BAZ1AQ9NRL2 1556 aaPredicted RBP40.95■■■■■ 4.15
PIF1-208ENST00000560444 SMARCA4P51532 1647 aa40.67■■■■■ 4.1
PIF1-208ENST00000560444 WIZO95785 1651 aa40.6■■■■■ 4.09
PIF1-208ENST00000560444 CHIC1Q5VXU3 224 aa40.44■■■■■ 4.06
PIF1-208ENST00000560444 EIF4G1Q04637 1599 aaKnown RBP40.26■■■■■ 4.04
PIF1-208ENST00000560444 TOP2AP11388 1531 aaKnown RBP40.26■■■■■ 4.04
PIF1-208ENST00000560444 PEG3Q9GZU2 1588 aa40.22■■■■■ 4.03
PIF1-208ENST00000560444 ATAD2BQ9ULI0 1458 aa39.98■■■■□ 3.99
PIF1-208ENST00000560444 SMARCA2P51531 1590 aa39.98■■■■□ 3.99
PIF1-208ENST00000560444 CCDC88BA6NC98 1476 aa39.87■■■■□ 3.97
PIF1-208ENST00000560444 CC2D2AQ9P2K1 1620 aa39.81■■■■□ 3.96
PIF1-208ENST00000560444 BAZ1BQ9UIG0 1483 aaKnown RBP39.76■■■■□ 3.96
PIF1-208ENST00000560444 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
PIF1-208ENST00000560444 HMGXB3Q12766 1538 aa39.56■■■■□ 3.92
PIF1-208ENST00000560444 TRIM41Q8WV44 630 aa39.55■■■■□ 3.92
PIF1-208ENST00000560444 DNAJC5BQ9UF47 199 aa39.32■■■■□ 3.88
PIF1-208ENST00000560444 ABCC8Q09428 1581 aa39.04■■■■□ 3.84
PIF1-208ENST00000560444 WRNQ14191 1432 aaPredicted RBP eCLIP38.86■■■■□ 3.81
PIF1-208ENST00000560444 LOC105371045A0A1W2PR82 267 aa38.86■■■■□ 3.81
PIF1-208ENST00000560444 CFTRP13569 1480 aa38.81■■■■□ 3.8
PIF1-208ENST00000560444 FAM9AQ8IZU1 332 aaPredicted RBP38.74■■■■□ 3.79
PIF1-208ENST00000560444 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
PIF1-208ENST00000560444 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
PIF1-208ENST00000560444 EEA1Q15075 1411 aa38.56■■■■□ 3.76
PIF1-208ENST00000560444 NESP48681 1621 aa38.5■■■■□ 3.75
PIF1-208ENST00000560444 PRDM2Q13029 1718 aa38.48■■■■□ 3.75
PIF1-208ENST00000560444 TOP2BQ02880 1626 aa38.48■■■■□ 3.75
PIF1-208ENST00000560444 SOGA1O94964 1423 aa38.45■■■■□ 3.75
PIF1-208ENST00000560444 BIVM-ERCC5R4GMW8 1640 aa38.41■■■■□ 3.74
PIF1-208ENST00000560444 LAMC3Q9Y6N6 1575 aa38.4■■■■□ 3.74
PIF1-208ENST00000560444 CSRNP3Q8WYN3 585 aa38.3■■■■□ 3.72
PIF1-208ENST00000560444 CUX1P39880 1505 aa38.28■■■■□ 3.72
PIF1-208ENST00000560444 RUSC2Q8N2Y8 1516 aa38.25■■■■□ 3.71
PIF1-208ENST00000560444 FANCD2Q9BXW9 1451 aa38.22■■■■□ 3.71
PIF1-208ENST00000560444 PDS5BQ9NTI5 1447 aa38.15■■■■□ 3.7
PIF1-208ENST00000560444 EHMT2Q96KQ7 1210 aa38.11■■■■□ 3.69
PIF1-208ENST00000560444 CEP164Q9UPV0 1460 aa38.04■■■■□ 3.68
PIF1-208ENST00000560444 KIF21AQ7Z4S6 1674 aa38■■■■□ 3.67
PIF1-208ENST00000560444 GOLGA3Q08378 1498 aa37.97■■■■□ 3.67
PIF1-208ENST00000560444 TNIKQ9UKE5 1360 aa37.96■■■■□ 3.67
PIF1-208ENST00000560444 KIF21BO75037 1637 aa37.93■■■■□ 3.66
PIF1-208ENST00000560444 KIF27Q86VH2 1401 aa37.89■■■■□ 3.66
PIF1-208ENST00000560444 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
PIF1-208ENST00000560444 FGD5Q6ZNL6 1462 aa37.82■■■■□ 3.65
PIF1-208ENST00000560444 UBTFP17480 764 aaKnown RBP37.81■■■■□ 3.64
PIF1-208ENST00000560444 ERCC6Q03468 1493 aa37.8■■■■□ 3.64
PIF1-208ENST00000560444 URB2Q14146 1524 aaKnown RBP37.78■■■■□ 3.64
PIF1-208ENST00000560444 TOPBP1Q92547 1522 aa37.77■■■■□ 3.64
PIF1-208ENST00000560444 CEP162Q5TB80 1403 aa37.71■■■■□ 3.63
PIF1-208ENST00000560444 PRXQ9BXM0 1461 aa37.7■■■■□ 3.63
PIF1-208ENST00000560444 MRC2Q9UBG0 1479 aa37.69■■■■□ 3.62
PIF1-208ENST00000560444 CUX2O14529 1486 aa37.66■■■■□ 3.62
PIF1-208ENST00000560444 ERICH3Q5RHP9 1530 aa37.65■■■■□ 3.62
PIF1-208ENST00000560444 RAPGEF2Q9Y4G8 1499 aa37.65■■■■□ 3.62
PIF1-208ENST00000560444 POLA1P09884 1462 aaPredicted RBP37.61■■■■□ 3.61
PIF1-208ENST00000560444 ABCA10Q8WWZ4 1543 aa37.54■■■■□ 3.6
PIF1-208ENST00000560444 IGF1RP08069 1367 aa37.53■■■■□ 3.6
PIF1-208ENST00000560444 THOC2Q8NI27 1593 aaKnown RBP37.49■■■■□ 3.59
PIF1-208ENST00000560444 WDR62O43379 1518 aa37.49■■■■□ 3.59
PIF1-208ENST00000560444 RAD54L2Q9Y4B4 1467 aa37.47■■■■□ 3.59
PIF1-208ENST00000560444 TRIM26Q12899 539 aaPredicted RBP37.44■■■■□ 3.58
PIF1-208ENST00000560444 PCGF6Q9BYE7 350 aa37.43■■■■□ 3.58
PIF1-208ENST00000560444 CLIP1P30622 1438 aa37.37■■■■□ 3.57
PIF1-208ENST00000560444 CARMIL1Q5VZK9 1371 aa37.34■■■■□ 3.57
PIF1-208ENST00000560444 WDR97A6NE52 1622 aa37.28■■■■□ 3.56
PIF1-208ENST00000560444 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
PIF1-208ENST00000560444 IFT140Q96RY7 1462 aa37.15■■■■□ 3.54
PIF1-208ENST00000560444 ABCA5Q8WWZ7 1642 aa37.14■■■■□ 3.54
PIF1-208ENST00000560444 CUL7Q14999 1698 aa37.14■■■■□ 3.54
PIF1-208ENST00000560444 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
PIF1-208ENST00000560444 GAPVD1Q14C86 1478 aa37.11■■■■□ 3.53
PIF1-208ENST00000560444 VPS8Q8N3P4 1428 aa37.1■■■■□ 3.53
PIF1-208ENST00000560444 RANGAP1P46060 587 aaPredicted RBP36.99■■■■□ 3.51
PIF1-208ENST00000560444 ZNF608Q9ULD9 1512 aaPredicted RBP36.98■■■■□ 3.51
PIF1-208ENST00000560444 AQRO60306 1485 aaKnown RBP eCLIP36.97■■■■□ 3.51
PIF1-208ENST00000560444 PPARGC1BQ86YN6 1023 aaKnown RBP36.94■■■■□ 3.5
PIF1-208ENST00000560444 ARAP1Q96P48 1450 aa36.92■■■■□ 3.5
PIF1-208ENST00000560444 ARHGAP35Q9NRY4 1499 aa36.88■■■■□ 3.49
PIF1-208ENST00000560444 EIF4G3O43432 1585 aaKnown RBP36.83■■■■□ 3.49
PIF1-208ENST00000560444 APLP2Q06481 763 aa36.81■■■■□ 3.48
PIF1-208ENST00000560444 GRIN2BQ13224 1484 aa36.79■■■■□ 3.48
PIF1-208ENST00000560444 PBRM1Q86U86 1689 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms