RNA–Protein interactions for RNA: ENST00000560438.5

SLC28A2-203, Transcript of solute carrier family 28 member 2, humanhuman

TSL 4

Gene SLC28A2, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2-203ENST00000560438 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
SLC28A2-203ENST00000560438 ABCC9O60706 1549 aa24.05■■□□□ 1.44
SLC28A2-203ENST00000560438 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
SLC28A2-203ENST00000560438 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
SLC28A2-203ENST00000560438 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.25
SLC28A2-203ENST00000560438 NACADO15069 1562 aa22.73■■□□□ 1.23
SLC28A2-203ENST00000560438 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
SLC28A2-203ENST00000560438 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
SLC28A2-203ENST00000560438 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
SLC28A2-203ENST00000560438 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
SLC28A2-203ENST00000560438 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
SLC28A2-203ENST00000560438 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
SLC28A2-203ENST00000560438 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
SLC28A2-203ENST00000560438 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
SLC28A2-203ENST00000560438 SCRIBQ14160 1630 aa22■■□□□ 1.11
SLC28A2-203ENST00000560438 AEBP2Q6ZN18 517 aaPredicted RBP21.99■■□□□ 1.11
SLC28A2-203ENST00000560438 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
SLC28A2-203ENST00000560438 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
SLC28A2-203ENST00000560438 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.05
SLC28A2-203ENST00000560438 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
SLC28A2-203ENST00000560438 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
SLC28A2-203ENST00000560438 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
SLC28A2-203ENST00000560438 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
SLC28A2-203ENST00000560438 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
SLC28A2-203ENST00000560438 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
SLC28A2-203ENST00000560438 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
SLC28A2-203ENST00000560438 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
SLC28A2-203ENST00000560438 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
SLC28A2-203ENST00000560438 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
SLC28A2-203ENST00000560438 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
SLC28A2-203ENST00000560438 NESP48681 1621 aa20.67■□□□□ 0.9
SLC28A2-203ENST00000560438 CUX2O14529 1486 aa20.61■□□□□ 0.89
SLC28A2-203ENST00000560438 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
SLC28A2-203ENST00000560438 WIZO95785 1651 aa20.51■□□□□ 0.87
SLC28A2-203ENST00000560438 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
SLC28A2-203ENST00000560438 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
SLC28A2-203ENST00000560438 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
SLC28A2-203ENST00000560438 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
SLC28A2-203ENST00000560438 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
SLC28A2-203ENST00000560438 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
SLC28A2-203ENST00000560438 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
SLC28A2-203ENST00000560438 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
SLC28A2-203ENST00000560438 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
SLC28A2-203ENST00000560438 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
SLC28A2-203ENST00000560438 CFTRP13569 1480 aa20.17■□□□□ 0.82
SLC28A2-203ENST00000560438 WDR62O43379 1518 aa20.11■□□□□ 0.81
SLC28A2-203ENST00000560438 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
SLC28A2-203ENST00000560438 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
SLC28A2-203ENST00000560438 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
SLC28A2-203ENST00000560438 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
SLC28A2-203ENST00000560438 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
SLC28A2-203ENST00000560438 SUPT5HO00267 1087 aaKnown RBP19.8■□□□□ 0.76
SLC28A2-203ENST00000560438 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
SLC28A2-203ENST00000560438 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
SLC28A2-203ENST00000560438 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
SLC28A2-203ENST00000560438 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
SLC28A2-203ENST00000560438 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
SLC28A2-203ENST00000560438 FBLN2P98095 1184 aa19.62■□□□□ 0.73
SLC28A2-203ENST00000560438 AQRO60306 1485 aaKnown RBP eCLIP19.61■□□□□ 0.73
SLC28A2-203ENST00000560438 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
SLC28A2-203ENST00000560438 SOGA1O94964 1423 aa19.59■□□□□ 0.73
SLC28A2-203ENST00000560438 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
SLC28A2-203ENST00000560438 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
SLC28A2-203ENST00000560438 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
SLC28A2-203ENST00000560438 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
SLC28A2-203ENST00000560438 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
SLC28A2-203ENST00000560438 CUX1P39880 1505 aa19.48■□□□□ 0.71
SLC28A2-203ENST00000560438 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
SLC28A2-203ENST00000560438 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
SLC28A2-203ENST00000560438 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
SLC28A2-203ENST00000560438 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
SLC28A2-203ENST00000560438 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
SLC28A2-203ENST00000560438 CHD1O14646 1710 aa19.42■□□□□ 0.7
SLC28A2-203ENST00000560438 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
SLC28A2-203ENST00000560438 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
SLC28A2-203ENST00000560438 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
SLC28A2-203ENST00000560438 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
SLC28A2-203ENST00000560438 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
SLC28A2-203ENST00000560438 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
SLC28A2-203ENST00000560438 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
SLC28A2-203ENST00000560438 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
SLC28A2-203ENST00000560438 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
SLC28A2-203ENST00000560438 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
SLC28A2-203ENST00000560438 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
SLC28A2-203ENST00000560438 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
SLC28A2-203ENST00000560438 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
SLC28A2-203ENST00000560438 ARAP1Q96P48 1450 aa19.19■□□□□ 0.66
SLC28A2-203ENST00000560438 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
SLC28A2-203ENST00000560438 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
SLC28A2-203ENST00000560438 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
SLC28A2-203ENST00000560438 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
SLC28A2-203ENST00000560438 GRIN2AQ12879 1464 aa19.08■□□□□ 0.64
SLC28A2-203ENST00000560438 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
SLC28A2-203ENST00000560438 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
SLC28A2-203ENST00000560438 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.64
SLC28A2-203ENST00000560438 NUP160Q12769 1436 aa18.98■□□□□ 0.63
SLC28A2-203ENST00000560438 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
SLC28A2-203ENST00000560438 JPH4Q96JJ6 628 aa18.94■□□□□ 0.62
SLC28A2-203ENST00000560438 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
SLC28A2-203ENST00000560438 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms