RNA–Protein interactions for RNA: ENST00000560396.5

IDH3A-218, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-218ENST00000560396 NISCHQ9Y2I1 1504 aa34.59■■■■□ 3.13
IDH3A-218ENST00000560396 ABCC9O60706 1549 aa31.09■■■□□ 2.57
IDH3A-218ENST00000560396 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
IDH3A-218ENST00000560396 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
IDH3A-218ENST00000560396 NACADO15069 1562 aa29.4■■■□□ 2.3
IDH3A-218ENST00000560396 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
IDH3A-218ENST00000560396 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
IDH3A-218ENST00000560396 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.23
IDH3A-218ENST00000560396 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
IDH3A-218ENST00000560396 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
IDH3A-218ENST00000560396 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
IDH3A-218ENST00000560396 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
IDH3A-218ENST00000560396 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
IDH3A-218ENST00000560396 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
IDH3A-218ENST00000560396 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
IDH3A-218ENST00000560396 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
IDH3A-218ENST00000560396 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
IDH3A-218ENST00000560396 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
IDH3A-218ENST00000560396 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
IDH3A-218ENST00000560396 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
IDH3A-218ENST00000560396 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
IDH3A-218ENST00000560396 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
IDH3A-218ENST00000560396 DNAJC5Q9H3Z4 198 aa26.93■■□□□ 1.9
IDH3A-218ENST00000560396 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
IDH3A-218ENST00000560396 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
IDH3A-218ENST00000560396 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
IDH3A-218ENST00000560396 CUX2O14529 1486 aa26.85■■□□□ 1.89
IDH3A-218ENST00000560396 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
IDH3A-218ENST00000560396 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
IDH3A-218ENST00000560396 NESP48681 1621 aa26.66■■□□□ 1.86
IDH3A-218ENST00000560396 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
IDH3A-218ENST00000560396 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
IDH3A-218ENST00000560396 PDS5BQ9NTI5 1447 aa26.44■■□□□ 1.82
IDH3A-218ENST00000560396 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
IDH3A-218ENST00000560396 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
IDH3A-218ENST00000560396 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
IDH3A-218ENST00000560396 WIZO95785 1651 aa26.29■■□□□ 1.8
IDH3A-218ENST00000560396 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
IDH3A-218ENST00000560396 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
IDH3A-218ENST00000560396 CEP164Q9UPV0 1460 aa26.05■■□□□ 1.76
IDH3A-218ENST00000560396 WDR62O43379 1518 aa26.05■■□□□ 1.76
IDH3A-218ENST00000560396 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
IDH3A-218ENST00000560396 CFTRP13569 1480 aa25.99■■□□□ 1.75
IDH3A-218ENST00000560396 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
IDH3A-218ENST00000560396 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
IDH3A-218ENST00000560396 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
IDH3A-218ENST00000560396 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
IDH3A-218ENST00000560396 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
IDH3A-218ENST00000560396 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
IDH3A-218ENST00000560396 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
IDH3A-218ENST00000560396 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
IDH3A-218ENST00000560396 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
IDH3A-218ENST00000560396 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
IDH3A-218ENST00000560396 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
IDH3A-218ENST00000560396 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
IDH3A-218ENST00000560396 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
IDH3A-218ENST00000560396 AQRO60306 1485 aaKnown RBP eCLIP25.24■■□□□ 1.63
IDH3A-218ENST00000560396 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
IDH3A-218ENST00000560396 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
IDH3A-218ENST00000560396 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
IDH3A-218ENST00000560396 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
IDH3A-218ENST00000560396 FBLN2P98095 1184 aa25.19■■□□□ 1.62
IDH3A-218ENST00000560396 SOGA1O94964 1423 aa25.18■■□□□ 1.62
IDH3A-218ENST00000560396 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
IDH3A-218ENST00000560396 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
IDH3A-218ENST00000560396 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
IDH3A-218ENST00000560396 CHD1O14646 1710 aa25.1■■□□□ 1.61
IDH3A-218ENST00000560396 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
IDH3A-218ENST00000560396 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
IDH3A-218ENST00000560396 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
IDH3A-218ENST00000560396 CUX1P39880 1505 aa25.01■■□□□ 1.59
IDH3A-218ENST00000560396 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
IDH3A-218ENST00000560396 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
IDH3A-218ENST00000560396 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
IDH3A-218ENST00000560396 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
IDH3A-218ENST00000560396 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
IDH3A-218ENST00000560396 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
IDH3A-218ENST00000560396 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
IDH3A-218ENST00000560396 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
IDH3A-218ENST00000560396 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
IDH3A-218ENST00000560396 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
IDH3A-218ENST00000560396 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
IDH3A-218ENST00000560396 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
IDH3A-218ENST00000560396 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
IDH3A-218ENST00000560396 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
IDH3A-218ENST00000560396 ABCA5Q8WWZ7 1642 aa24.71■■□□□ 1.55
IDH3A-218ENST00000560396 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
IDH3A-218ENST00000560396 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
IDH3A-218ENST00000560396 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
IDH3A-218ENST00000560396 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
IDH3A-218ENST00000560396 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
IDH3A-218ENST00000560396 NUP160Q12769 1436 aa24.51■■□□□ 1.51
IDH3A-218ENST00000560396 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
IDH3A-218ENST00000560396 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
IDH3A-218ENST00000560396 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
IDH3A-218ENST00000560396 SHROOM2Q13796 1616 aa24.36■■□□□ 1.49
IDH3A-218ENST00000560396 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
IDH3A-218ENST00000560396 PRG4Q92954 1404 aaPredicted RBP24.31■■□□□ 1.48
IDH3A-218ENST00000560396 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
IDH3A-218ENST00000560396 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 217.3 ms