RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
IRF9-209ENST00000560365 ABCC9O60706 1549 aa26.66■■□□□ 1.86
IRF9-209ENST00000560365 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
IRF9-209ENST00000560365 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
IRF9-209ENST00000560365 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
IRF9-209ENST00000560365 NACADO15069 1562 aa25■■□□□ 1.59
IRF9-209ENST00000560365 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
IRF9-209ENST00000560365 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
IRF9-209ENST00000560365 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
IRF9-209ENST00000560365 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
IRF9-209ENST00000560365 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
IRF9-209ENST00000560365 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
IRF9-209ENST00000560365 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
IRF9-209ENST00000560365 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
IRF9-209ENST00000560365 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
IRF9-209ENST00000560365 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
IRF9-209ENST00000560365 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
IRF9-209ENST00000560365 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
IRF9-209ENST00000560365 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
IRF9-209ENST00000560365 CUX2O14529 1486 aa23.12■■□□□ 1.29
IRF9-209ENST00000560365 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
IRF9-209ENST00000560365 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
IRF9-209ENST00000560365 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
IRF9-209ENST00000560365 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
IRF9-209ENST00000560365 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
IRF9-209ENST00000560365 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
IRF9-209ENST00000560365 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
IRF9-209ENST00000560365 NESP48681 1621 aa22.77■■□□□ 1.24
IRF9-209ENST00000560365 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
IRF9-209ENST00000560365 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
IRF9-209ENST00000560365 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
IRF9-209ENST00000560365 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
IRF9-209ENST00000560365 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
IRF9-209ENST00000560365 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
IRF9-209ENST00000560365 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
IRF9-209ENST00000560365 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
IRF9-209ENST00000560365 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
IRF9-209ENST00000560365 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
IRF9-209ENST00000560365 WDR62O43379 1518 aa22.25■■□□□ 1.15
IRF9-209ENST00000560365 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
IRF9-209ENST00000560365 WIZO95785 1651 aa22.18■■□□□ 1.14
IRF9-209ENST00000560365 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
IRF9-209ENST00000560365 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
IRF9-209ENST00000560365 CFTRP13569 1480 aa22.05■■□□□ 1.12
IRF9-209ENST00000560365 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
IRF9-209ENST00000560365 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
IRF9-209ENST00000560365 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
IRF9-209ENST00000560365 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
IRF9-209ENST00000560365 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
IRF9-209ENST00000560365 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
IRF9-209ENST00000560365 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
IRF9-209ENST00000560365 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
IRF9-209ENST00000560365 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
IRF9-209ENST00000560365 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
IRF9-209ENST00000560365 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
IRF9-209ENST00000560365 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
IRF9-209ENST00000560365 ARHGEF11O15085 1522 aa21.63■■□□□ 1.05
IRF9-209ENST00000560365 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
IRF9-209ENST00000560365 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
IRF9-209ENST00000560365 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
IRF9-209ENST00000560365 FBLN2P98095 1184 aa21.54■■□□□ 1.04
IRF9-209ENST00000560365 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
IRF9-209ENST00000560365 TRHP20396 242 aaPredicted RBP21.49■■□□□ 1.03
IRF9-209ENST00000560365 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
IRF9-209ENST00000560365 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
IRF9-209ENST00000560365 CHD1O14646 1710 aa21.4■■□□□ 1.02
IRF9-209ENST00000560365 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
IRF9-209ENST00000560365 SOGA1O94964 1423 aa21.38■■□□□ 1.01
IRF9-209ENST00000560365 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
IRF9-209ENST00000560365 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
IRF9-209ENST00000560365 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
IRF9-209ENST00000560365 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
IRF9-209ENST00000560365 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
IRF9-209ENST00000560365 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
IRF9-209ENST00000560365 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
IRF9-209ENST00000560365 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
IRF9-209ENST00000560365 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
IRF9-209ENST00000560365 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
IRF9-209ENST00000560365 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
IRF9-209ENST00000560365 CUX1P39880 1505 aa21.15■□□□□ 0.98
IRF9-209ENST00000560365 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
IRF9-209ENST00000560365 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
IRF9-209ENST00000560365 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
IRF9-209ENST00000560365 PBRM1Q86U86 1689 aa21■□□□□ 0.95
IRF9-209ENST00000560365 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
IRF9-209ENST00000560365 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
IRF9-209ENST00000560365 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
IRF9-209ENST00000560365 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
IRF9-209ENST00000560365 NUP160Q12769 1436 aa20.84■□□□□ 0.93
IRF9-209ENST00000560365 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
IRF9-209ENST00000560365 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
IRF9-209ENST00000560365 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
IRF9-209ENST00000560365 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
IRF9-209ENST00000560365 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
IRF9-209ENST00000560365 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
IRF9-209ENST00000560365 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
IRF9-209ENST00000560365 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
IRF9-209ENST00000560365 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
IRF9-209ENST00000560365 NPM1P06748 294 aaKnown RBP eCLIP20.69■□□□□ 0.9
IRF9-209ENST00000560365 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms