RNA–Protein interactions for RNA: ENST00000560274.1

RPLP1-205, Transcript of ribosomal protein lateral stalk subunit P1, humanhuman

TSL 3 BASIC

Gene RPLP1, Length 256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP1-205ENST00000560274 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
RPLP1-205ENST00000560274 ABCC9O60706 1549 aa18.13■□□□□ 0.49
RPLP1-205ENST00000560274 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
RPLP1-205ENST00000560274 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
RPLP1-205ENST00000560274 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
RPLP1-205ENST00000560274 NACADO15069 1562 aa17.06■□□□□ 0.32
RPLP1-205ENST00000560274 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
RPLP1-205ENST00000560274 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
RPLP1-205ENST00000560274 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPLP1-205ENST00000560274 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
RPLP1-205ENST00000560274 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
RPLP1-205ENST00000560274 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
RPLP1-205ENST00000560274 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
RPLP1-205ENST00000560274 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
RPLP1-205ENST00000560274 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
RPLP1-205ENST00000560274 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
RPLP1-205ENST00000560274 CECR2Q9BXF3 1484 aa16.3■□□□□ 0.2
RPLP1-205ENST00000560274 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
RPLP1-205ENST00000560274 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
RPLP1-205ENST00000560274 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
RPLP1-205ENST00000560274 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
RPLP1-205ENST00000560274 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
RPLP1-205ENST00000560274 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
RPLP1-205ENST00000560274 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
RPLP1-205ENST00000560274 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
RPLP1-205ENST00000560274 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RPLP1-205ENST00000560274 CUX2O14529 1486 aa15.6■□□□□ 0.09
RPLP1-205ENST00000560274 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
RPLP1-205ENST00000560274 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
RPLP1-205ENST00000560274 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
RPLP1-205ENST00000560274 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
RPLP1-205ENST00000560274 NESP48681 1621 aa15.54■□□□□ 0.08
RPLP1-205ENST00000560274 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
RPLP1-205ENST00000560274 WIZO95785 1651 aa15.36■□□□□ 0.05
RPLP1-205ENST00000560274 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
RPLP1-205ENST00000560274 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
RPLP1-205ENST00000560274 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
RPLP1-205ENST00000560274 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
RPLP1-205ENST00000560274 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
RPLP1-205ENST00000560274 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
RPLP1-205ENST00000560274 CFTRP13569 1480 aa15.14■□□□□ 0.01
RPLP1-205ENST00000560274 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
RPLP1-205ENST00000560274 WDR62O43379 1518 aa15.12■□□□□ 0.01
RPLP1-205ENST00000560274 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
RPLP1-205ENST00000560274 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
RPLP1-205ENST00000560274 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
RPLP1-205ENST00000560274 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
RPLP1-205ENST00000560274 URB2Q14146 1524 aaKnown RBP14.96□□□□□ -0.02
RPLP1-205ENST00000560274 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
RPLP1-205ENST00000560274 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
RPLP1-205ENST00000560274 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
RPLP1-205ENST00000560274 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
RPLP1-205ENST00000560274 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
RPLP1-205ENST00000560274 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
RPLP1-205ENST00000560274 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
RPLP1-205ENST00000560274 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
RPLP1-205ENST00000560274 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
RPLP1-205ENST00000560274 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
RPLP1-205ENST00000560274 SUPT5HO00267 1087 aaKnown RBP14.71□□□□□ -0.05
RPLP1-205ENST00000560274 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
RPLP1-205ENST00000560274 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
RPLP1-205ENST00000560274 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
RPLP1-205ENST00000560274 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
RPLP1-205ENST00000560274 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.064e-7■■■□□ 18.8
RPLP1-205ENST00000560274 CHD1O14646 1710 aa14.64□□□□□ -0.07
RPLP1-205ENST00000560274 SOGA1O94964 1423 aa14.64□□□□□ -0.07
RPLP1-205ENST00000560274 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
RPLP1-205ENST00000560274 CUX1P39880 1505 aa14.61□□□□□ -0.07
RPLP1-205ENST00000560274 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
RPLP1-205ENST00000560274 FGD5Q6ZNL6 1462 aa14.59□□□□□ -0.07
RPLP1-205ENST00000560274 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
RPLP1-205ENST00000560274 ARAP1Q96P48 1450 aa14.54□□□□□ -0.08
RPLP1-205ENST00000560274 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
RPLP1-205ENST00000560274 FBLN2P98095 1184 aa14.53□□□□□ -0.08
RPLP1-205ENST00000560274 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
RPLP1-205ENST00000560274 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
RPLP1-205ENST00000560274 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
RPLP1-205ENST00000560274 CHMP7Q8WUX9 453 aaPredicted RBP14.46□□□□□ -0.09
RPLP1-205ENST00000560274 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
RPLP1-205ENST00000560274 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
RPLP1-205ENST00000560274 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
RPLP1-205ENST00000560274 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
RPLP1-205ENST00000560274 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
RPLP1-205ENST00000560274 SYNJ2O15056 1496 aa14.42□□□□□ -0.1
RPLP1-205ENST00000560274 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
RPLP1-205ENST00000560274 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
RPLP1-205ENST00000560274 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
RPLP1-205ENST00000560274 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
RPLP1-205ENST00000560274 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
RPLP1-205ENST00000560274 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
RPLP1-205ENST00000560274 GRIN2AQ12879 1464 aa14.28□□□□□ -0.12
RPLP1-205ENST00000560274 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
RPLP1-205ENST00000560274 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
RPLP1-205ENST00000560274 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
RPLP1-205ENST00000560274 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
RPLP1-205ENST00000560274 NUP160Q12769 1436 aa14.24□□□□□ -0.13
RPLP1-205ENST00000560274 CEP170Q5SW79 1584 aa14.21□□□□□ -0.14
RPLP1-205ENST00000560274 IGF1RP08069 1367 aa14.17□□□□□ -0.14
RPLP1-205ENST00000560274 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
RPLP1-205ENST00000560274 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms