RNA–Protein interactions for RNA: ENST00000560246.1

FAM227B-210, Transcript of family with sequence similarity 227 member B, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene FAM227B, Length 911 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-210ENST00000560246 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
FAM227B-210ENST00000560246 ABCC9O60706 1549 aa31.31■■■□□ 2.6
FAM227B-210ENST00000560246 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
FAM227B-210ENST00000560246 RB1CC1Q8TDY2 1594 aa29.75■■■□□ 2.35
FAM227B-210ENST00000560246 NACADO15069 1562 aa29.56■■■□□ 2.32
FAM227B-210ENST00000560246 DNAJC5BQ9UF47 199 aa29.5■■■□□ 2.31
FAM227B-210ENST00000560246 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
FAM227B-210ENST00000560246 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
FAM227B-210ENST00000560246 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
FAM227B-210ENST00000560246 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
FAM227B-210ENST00000560246 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
FAM227B-210ENST00000560246 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
FAM227B-210ENST00000560246 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
FAM227B-210ENST00000560246 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
FAM227B-210ENST00000560246 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
FAM227B-210ENST00000560246 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
FAM227B-210ENST00000560246 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
FAM227B-210ENST00000560246 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
FAM227B-210ENST00000560246 EIF4G1Q04637 1599 aaKnown RBP28.21■■■□□ 2.11
FAM227B-210ENST00000560246 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
FAM227B-210ENST00000560246 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
FAM227B-210ENST00000560246 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
FAM227B-210ENST00000560246 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
FAM227B-210ENST00000560246 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
FAM227B-210ENST00000560246 DNAJC5Q9H3Z4 198 aa27.1■■□□□ 1.93
FAM227B-210ENST00000560246 HMGXB3Q12766 1538 aa27.08■■□□□ 1.93
FAM227B-210ENST00000560246 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
FAM227B-210ENST00000560246 CUX2O14529 1486 aa27■■□□□ 1.91
FAM227B-210ENST00000560246 ERCC6Q03468 1493 aa27■■□□□ 1.91
FAM227B-210ENST00000560246 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
FAM227B-210ENST00000560246 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
FAM227B-210ENST00000560246 NESP48681 1621 aa26.9■■□□□ 1.9
FAM227B-210ENST00000560246 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
FAM227B-210ENST00000560246 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
FAM227B-210ENST00000560246 THOC2Q8NI27 1593 aaKnown RBP26.62■■□□□ 1.85
FAM227B-210ENST00000560246 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
FAM227B-210ENST00000560246 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
FAM227B-210ENST00000560246 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
FAM227B-210ENST00000560246 WIZO95785 1651 aa26.49■■□□□ 1.83
FAM227B-210ENST00000560246 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
FAM227B-210ENST00000560246 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
FAM227B-210ENST00000560246 WDR62O43379 1518 aa26.25■■□□□ 1.79
FAM227B-210ENST00000560246 CFTRP13569 1480 aa26.17■■□□□ 1.78
FAM227B-210ENST00000560246 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
FAM227B-210ENST00000560246 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
FAM227B-210ENST00000560246 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
FAM227B-210ENST00000560246 URB2Q14146 1524 aaKnown RBP25.97■■□□□ 1.75
FAM227B-210ENST00000560246 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
FAM227B-210ENST00000560246 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
FAM227B-210ENST00000560246 PRDM2Q13029 1718 aa25.83■■□□□ 1.72
FAM227B-210ENST00000560246 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
FAM227B-210ENST00000560246 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
FAM227B-210ENST00000560246 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
FAM227B-210ENST00000560246 ZNF608Q9ULD9 1512 aaPredicted RBP25.67■■□□□ 1.7
FAM227B-210ENST00000560246 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
FAM227B-210ENST00000560246 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
FAM227B-210ENST00000560246 EIF4G3O43432 1585 aaKnown RBP25.47■■□□□ 1.67
FAM227B-210ENST00000560246 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
FAM227B-210ENST00000560246 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.66
FAM227B-210ENST00000560246 RIMBP3CA6NJZ7 1639 aa25.42■■□□□ 1.66
FAM227B-210ENST00000560246 RIMBP3BA6NNM3 1639 aa25.42■■□□□ 1.66
FAM227B-210ENST00000560246 RIMBP3Q9UFD9 1639 aa25.42■■□□□ 1.66
FAM227B-210ENST00000560246 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
FAM227B-210ENST00000560246 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
FAM227B-210ENST00000560246 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
FAM227B-210ENST00000560246 SOGA1O94964 1423 aa25.29■■□□□ 1.64
FAM227B-210ENST00000560246 CHD1O14646 1710 aa25.28■■□□□ 1.64
FAM227B-210ENST00000560246 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
FAM227B-210ENST00000560246 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
FAM227B-210ENST00000560246 FBLN2P98095 1184 aa25.22■■□□□ 1.63
FAM227B-210ENST00000560246 CUX1P39880 1505 aa25.21■■□□□ 1.63
FAM227B-210ENST00000560246 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
FAM227B-210ENST00000560246 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
FAM227B-210ENST00000560246 SNAPC4Q5SXM2 1469 aa25.14■■□□□ 1.61
FAM227B-210ENST00000560246 ARAP1Q96P48 1450 aa25.12■■□□□ 1.61
FAM227B-210ENST00000560246 GRIN2BQ13224 1484 aa25.06■■□□□ 1.6
FAM227B-210ENST00000560246 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
FAM227B-210ENST00000560246 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
FAM227B-210ENST00000560246 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
FAM227B-210ENST00000560246 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
FAM227B-210ENST00000560246 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
FAM227B-210ENST00000560246 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
FAM227B-210ENST00000560246 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
FAM227B-210ENST00000560246 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
FAM227B-210ENST00000560246 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
FAM227B-210ENST00000560246 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
FAM227B-210ENST00000560246 TRHP20396 242 aaPredicted RBP24.87■■□□□ 1.57
FAM227B-210ENST00000560246 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
FAM227B-210ENST00000560246 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
FAM227B-210ENST00000560246 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
FAM227B-210ENST00000560246 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
FAM227B-210ENST00000560246 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
FAM227B-210ENST00000560246 NUP160Q12769 1436 aa24.69■■□□□ 1.54
FAM227B-210ENST00000560246 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
FAM227B-210ENST00000560246 CEP170Q5SW79 1584 aa24.66■■□□□ 1.54
FAM227B-210ENST00000560246 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
FAM227B-210ENST00000560246 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
FAM227B-210ENST00000560246 SHROOM2Q13796 1616 aa24.56■■□□□ 1.52
FAM227B-210ENST00000560246 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
FAM227B-210ENST00000560246 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms