RNA–Protein interactions for RNA: ENST00000559677.5

SPG21-210, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-210ENST00000559677 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
SPG21-210ENST00000559677 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
SPG21-210ENST00000559677 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
SPG21-210ENST00000559677 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
SPG21-210ENST00000559677 ABCC9O60706 1549 aa19.78■□□□□ 0.76
SPG21-210ENST00000559677 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
SPG21-210ENST00000559677 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
SPG21-210ENST00000559677 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
SPG21-210ENST00000559677 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
SPG21-210ENST00000559677 NACADO15069 1562 aa18.77■□□□□ 0.6
SPG21-210ENST00000559677 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
SPG21-210ENST00000559677 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
SPG21-210ENST00000559677 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
SPG21-210ENST00000559677 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
SPG21-210ENST00000559677 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
SPG21-210ENST00000559677 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
SPG21-210ENST00000559677 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
SPG21-210ENST00000559677 SCRIBQ14160 1630 aa18.1■□□□□ 0.49
SPG21-210ENST00000559677 FOXD1Q16676 465 aa18.04■□□□□ 0.48
SPG21-210ENST00000559677 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
SPG21-210ENST00000559677 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
SPG21-210ENST00000559677 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
SPG21-210ENST00000559677 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
SPG21-210ENST00000559677 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
SPG21-210ENST00000559677 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
SPG21-210ENST00000559677 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
SPG21-210ENST00000559677 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
SPG21-210ENST00000559677 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
SPG21-210ENST00000559677 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
SPG21-210ENST00000559677 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
SPG21-210ENST00000559677 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
SPG21-210ENST00000559677 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
SPG21-210ENST00000559677 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
SPG21-210ENST00000559677 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
SPG21-210ENST00000559677 NESP48681 1621 aa17.03■□□□□ 0.32
SPG21-210ENST00000559677 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
SPG21-210ENST00000559677 WIZO95785 1651 aa16.97■□□□□ 0.31
SPG21-210ENST00000559677 ADRA2BP18089 450 aa16.93■□□□□ 0.3
SPG21-210ENST00000559677 CUX2O14529 1486 aa16.93■□□□□ 0.3
SPG21-210ENST00000559677 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
SPG21-210ENST00000559677 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
SPG21-210ENST00000559677 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.3
SPG21-210ENST00000559677 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
SPG21-210ENST00000559677 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
SPG21-210ENST00000559677 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
SPG21-210ENST00000559677 MSH5O43196 834 aa16.78■□□□□ 0.28
SPG21-210ENST00000559677 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
SPG21-210ENST00000559677 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
SPG21-210ENST00000559677 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
SPG21-210ENST00000559677 CFTRP13569 1480 aa16.67■□□□□ 0.26
SPG21-210ENST00000559677 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
SPG21-210ENST00000559677 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
SPG21-210ENST00000559677 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
SPG21-210ENST00000559677 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
SPG21-210ENST00000559677 WDR62O43379 1518 aa16.55■□□□□ 0.24
SPG21-210ENST00000559677 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
SPG21-210ENST00000559677 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
SPG21-210ENST00000559677 PRDM2Q13029 1718 aa16.4■□□□□ 0.22
SPG21-210ENST00000559677 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
SPG21-210ENST00000559677 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
SPG21-210ENST00000559677 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
SPG21-210ENST00000559677 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
SPG21-210ENST00000559677 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
SPG21-210ENST00000559677 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
SPG21-210ENST00000559677 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
SPG21-210ENST00000559677 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
SPG21-210ENST00000559677 SOGA1O94964 1423 aa16.2■□□□□ 0.18
SPG21-210ENST00000559677 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPG21-210ENST00000559677 FBLN2P98095 1184 aa16.17■□□□□ 0.18
SPG21-210ENST00000559677 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SPG21-210ENST00000559677 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
SPG21-210ENST00000559677 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
SPG21-210ENST00000559677 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
SPG21-210ENST00000559677 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
SPG21-210ENST00000559677 CUX1P39880 1505 aa16.09■□□□□ 0.17
SPG21-210ENST00000559677 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
SPG21-210ENST00000559677 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
SPG21-210ENST00000559677 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
SPG21-210ENST00000559677 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
SPG21-210ENST00000559677 CHD1O14646 1710 aa15.96■□□□□ 0.15
SPG21-210ENST00000559677 GAPVD1Q14C86 1478 aa15.96■□□□□ 0.14
SPG21-210ENST00000559677 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
SPG21-210ENST00000559677 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
SPG21-210ENST00000559677 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
SPG21-210ENST00000559677 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
SPG21-210ENST00000559677 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
SPG21-210ENST00000559677 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
SPG21-210ENST00000559677 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
SPG21-210ENST00000559677 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
SPG21-210ENST00000559677 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
SPG21-210ENST00000559677 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
SPG21-210ENST00000559677 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
SPG21-210ENST00000559677 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
SPG21-210ENST00000559677 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
SPG21-210ENST00000559677 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
SPG21-210ENST00000559677 ABCA5Q8WWZ7 1642 aa15.8■□□□□ 0.12
SPG21-210ENST00000559677 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
SPG21-210ENST00000559677 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
SPG21-210ENST00000559677 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
SPG21-210ENST00000559677 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms