RNA–Protein interactions for RNA: ENST00000559662.5

PKNOX2-211, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 588 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-211ENST00000559662 NISCHQ9Y2I1 1504 aa19.18■□□□□ 0.66
PKNOX2-211ENST00000559662 ABCC9O60706 1549 aa17.34■□□□□ 0.37
PKNOX2-211ENST00000559662 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
PKNOX2-211ENST00000559662 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
PKNOX2-211ENST00000559662 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
PKNOX2-211ENST00000559662 NACADO15069 1562 aa16.33■□□□□ 0.2
PKNOX2-211ENST00000559662 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
PKNOX2-211ENST00000559662 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
PKNOX2-211ENST00000559662 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
PKNOX2-211ENST00000559662 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
PKNOX2-211ENST00000559662 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
PKNOX2-211ENST00000559662 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
PKNOX2-211ENST00000559662 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
PKNOX2-211ENST00000559662 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
PKNOX2-211ENST00000559662 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.11
PKNOX2-211ENST00000559662 CC2D2AQ9P2K1 1620 aa15.64■□□□□ 0.09
PKNOX2-211ENST00000559662 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
PKNOX2-211ENST00000559662 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
PKNOX2-211ENST00000559662 ERCC6Q03468 1493 aa15.05■□□□□ -0
PKNOX2-211ENST00000559662 NCAPD3P42695 1498 aa15.02■□□□□ -0
PKNOX2-211ENST00000559662 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
PKNOX2-211ENST00000559662 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
PKNOX2-211ENST00000559662 ATAD2BQ9ULI0 1458 aa14.99□□□□□ -0.01
PKNOX2-211ENST00000559662 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
PKNOX2-211ENST00000559662 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
PKNOX2-211ENST00000559662 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
PKNOX2-211ENST00000559662 CUX2O14529 1486 aa14.93□□□□□ -0.02
PKNOX2-211ENST00000559662 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
PKNOX2-211ENST00000559662 NESP48681 1621 aa14.84□□□□□ -0.03
PKNOX2-211ENST00000559662 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
PKNOX2-211ENST00000559662 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
PKNOX2-211ENST00000559662 LAMC3Q9Y6N6 1575 aa14.75□□□□□ -0.05
PKNOX2-211ENST00000559662 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
PKNOX2-211ENST00000559662 KIF21AQ7Z4S6 1674 aa14.69□□□□□ -0.06
PKNOX2-211ENST00000559662 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
PKNOX2-211ENST00000559662 WIZO95785 1651 aa14.64□□□□□ -0.07
PKNOX2-211ENST00000559662 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PKNOX2-211ENST00000559662 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
PKNOX2-211ENST00000559662 CEP164Q9UPV0 1460 aa14.51□□□□□ -0.09
PKNOX2-211ENST00000559662 WDR62O43379 1518 aa14.47□□□□□ -0.09
PKNOX2-211ENST00000559662 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
PKNOX2-211ENST00000559662 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
PKNOX2-211ENST00000559662 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
PKNOX2-211ENST00000559662 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
PKNOX2-211ENST00000559662 CFTRP13569 1480 aa14.4□□□□□ -0.1
PKNOX2-211ENST00000559662 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
PKNOX2-211ENST00000559662 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
PKNOX2-211ENST00000559662 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
PKNOX2-211ENST00000559662 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
PKNOX2-211ENST00000559662 IFT140Q96RY7 1462 aa14.2□□□□□ -0.14
PKNOX2-211ENST00000559662 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
PKNOX2-211ENST00000559662 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
PKNOX2-211ENST00000559662 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
PKNOX2-211ENST00000559662 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
PKNOX2-211ENST00000559662 FBLN2P98095 1184 aa14.11□□□□□ -0.15
PKNOX2-211ENST00000559662 EIF4G3O43432 1585 aaKnown RBP14.1□□□□□ -0.15
PKNOX2-211ENST00000559662 RIMBP3CA6NJZ7 1639 aa14.08□□□□□ -0.16
PKNOX2-211ENST00000559662 RIMBP3BA6NNM3 1639 aa14.08□□□□□ -0.16
PKNOX2-211ENST00000559662 RIMBP3Q9UFD9 1639 aa14.08□□□□□ -0.16
PKNOX2-211ENST00000559662 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.16
PKNOX2-211ENST00000559662 CHD1O14646 1710 aa14.04□□□□□ -0.16
PKNOX2-211ENST00000559662 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
PKNOX2-211ENST00000559662 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
PKNOX2-211ENST00000559662 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
PKNOX2-211ENST00000559662 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
PKNOX2-211ENST00000559662 SOGA1O94964 1423 aa13.99□□□□□ -0.17
PKNOX2-211ENST00000559662 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
PKNOX2-211ENST00000559662 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
PKNOX2-211ENST00000559662 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
PKNOX2-211ENST00000559662 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
PKNOX2-211ENST00000559662 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
PKNOX2-211ENST00000559662 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
PKNOX2-211ENST00000559662 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
PKNOX2-211ENST00000559662 WDR97A6NE52 1622 aa13.9□□□□□ -0.19
PKNOX2-211ENST00000559662 CUX1P39880 1505 aa13.89□□□□□ -0.19
PKNOX2-211ENST00000559662 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
PKNOX2-211ENST00000559662 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
PKNOX2-211ENST00000559662 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
PKNOX2-211ENST00000559662 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
PKNOX2-211ENST00000559662 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
PKNOX2-211ENST00000559662 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
PKNOX2-211ENST00000559662 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
PKNOX2-211ENST00000559662 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
PKNOX2-211ENST00000559662 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
PKNOX2-211ENST00000559662 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
PKNOX2-211ENST00000559662 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
PKNOX2-211ENST00000559662 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
PKNOX2-211ENST00000559662 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
PKNOX2-211ENST00000559662 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
PKNOX2-211ENST00000559662 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
PKNOX2-211ENST00000559662 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
PKNOX2-211ENST00000559662 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
PKNOX2-211ENST00000559662 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
PKNOX2-211ENST00000559662 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
PKNOX2-211ENST00000559662 ERCC6L2Q5T890 1561 aa13.58□□□□□ -0.23
PKNOX2-211ENST00000559662 NUP160Q12769 1436 aa13.58□□□□□ -0.24
PKNOX2-211ENST00000559662 PRG4Q92954 1404 aaPredicted RBP13.54□□□□□ -0.24
PKNOX2-211ENST00000559662 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
PKNOX2-211ENST00000559662 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
PKNOX2-211ENST00000559662 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms