RNA–Protein interactions for RNA: ENST00000559216.5

TCF12-211, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-211ENST00000559216 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
TCF12-211ENST00000559216 ABCC9O60706 1549 aa15.1■□□□□ 0.01
TCF12-211ENST00000559216 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
TCF12-211ENST00000559216 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
TCF12-211ENST00000559216 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
TCF12-211ENST00000559216 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
TCF12-211ENST00000559216 UNC13AQ9UPW8 1703 aa14.11□□□□□ -0.15
TCF12-211ENST00000559216 NACADO15069 1562 aa13.92□□□□□ -0.18
TCF12-211ENST00000559216 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
TCF12-211ENST00000559216 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
TCF12-211ENST00000559216 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
TCF12-211ENST00000559216 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
TCF12-211ENST00000559216 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
TCF12-211ENST00000559216 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
TCF12-211ENST00000559216 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
TCF12-211ENST00000559216 CUX2O14529 1486 aa13.51□□□□□ -0.25
TCF12-211ENST00000559216 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
TCF12-211ENST00000559216 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
TCF12-211ENST00000559216 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
TCF12-211ENST00000559216 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
TCF12-211ENST00000559216 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
TCF12-211ENST00000559216 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
TCF12-211ENST00000559216 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
TCF12-211ENST00000559216 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
TCF12-211ENST00000559216 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
TCF12-211ENST00000559216 NESP48681 1621 aa12.8□□□□□ -0.36
TCF12-211ENST00000559216 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
TCF12-211ENST00000559216 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
TCF12-211ENST00000559216 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
TCF12-211ENST00000559216 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
TCF12-211ENST00000559216 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
TCF12-211ENST00000559216 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
TCF12-211ENST00000559216 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
TCF12-211ENST00000559216 WDR62O43379 1518 aa12.62□□□□□ -0.39
TCF12-211ENST00000559216 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
TCF12-211ENST00000559216 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
TCF12-211ENST00000559216 MRC2Q9UBG0 1479 aa12.52□□□□□ -0.41
TCF12-211ENST00000559216 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
TCF12-211ENST00000559216 PEG3Q9GZU2 1588 aa12.48□□□□□ -0.41
TCF12-211ENST00000559216 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
TCF12-211ENST00000559216 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
TCF12-211ENST00000559216 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
TCF12-211ENST00000559216 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
TCF12-211ENST00000559216 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
TCF12-211ENST00000559216 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.44
TCF12-211ENST00000559216 CHD1O14646 1710 aa12.26□□□□□ -0.45
TCF12-211ENST00000559216 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
TCF12-211ENST00000559216 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
TCF12-211ENST00000559216 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
TCF12-211ENST00000559216 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
TCF12-211ENST00000559216 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
TCF12-211ENST00000559216 PRDM2Q13029 1718 aa12.18□□□□□ -0.46
TCF12-211ENST00000559216 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
TCF12-211ENST00000559216 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
TCF12-211ENST00000559216 CYB5RLQ6IPT4 315 aa12.15□□□□□ -0.46
TCF12-211ENST00000559216 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
TCF12-211ENST00000559216 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
TCF12-211ENST00000559216 MROH2BQ7Z745 1585 aa12.06□□□□□ -0.48
TCF12-211ENST00000559216 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
TCF12-211ENST00000559216 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
TCF12-211ENST00000559216 CFTRP13569 1480 aa12.05□□□□□ -0.48
TCF12-211ENST00000559216 TARBP1Q13395 1621 aaKnown RBP11.98□□□□□ -0.49
TCF12-211ENST00000559216 ERCC6L2Q5T890 1561 aa11.93□□□□□ -0.5
TCF12-211ENST00000559216 WIZO95785 1651 aa11.92□□□□□ -0.5
TCF12-211ENST00000559216 CHIC1Q5VXU3 224 aa11.92□□□□□ -0.5
TCF12-211ENST00000559216 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
TCF12-211ENST00000559216 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
TCF12-211ENST00000559216 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
TCF12-211ENST00000559216 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
TCF12-211ENST00000559216 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
TCF12-211ENST00000559216 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
TCF12-211ENST00000559216 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
TCF12-211ENST00000559216 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.52
TCF12-211ENST00000559216 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
TCF12-211ENST00000559216 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
TCF12-211ENST00000559216 MAGI1Q96QZ7 1491 aaPredicted RBP11.75□□□□□ -0.53
TCF12-211ENST00000559216 KDM6BO15054 1643 aa11.75□□□□□ -0.53
TCF12-211ENST00000559216 TOP2AP11388 1531 aaKnown RBP11.74□□□□□ -0.53
TCF12-211ENST00000559216 PBRM1Q86U86 1689 aa11.71□□□□□ -0.53
TCF12-211ENST00000559216 DIP2BQ9P265 1576 aa11.71□□□□□ -0.53
TCF12-211ENST00000559216 POLA1P09884 1462 aaPredicted RBP11.71□□□□□ -0.53
TCF12-211ENST00000559216 SHROOM2Q13796 1616 aa11.71□□□□□ -0.54
TCF12-211ENST00000559216 SYNJ2O15056 1496 aa11.69□□□□□ -0.54
TCF12-211ENST00000559216 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
TCF12-211ENST00000559216 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
TCF12-211ENST00000559216 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
TCF12-211ENST00000559216 ABCC10Q5T3U5 1492 aa11.64□□□□□ -0.55
TCF12-211ENST00000559216 LMTK3Q96Q04 1460 aa11.64□□□□□ -0.55
TCF12-211ENST00000559216 CEP170Q5SW79 1584 aa11.64□□□□□ -0.55
TCF12-211ENST00000559216 FBLN2P98095 1184 aa11.63□□□□□ -0.55
TCF12-211ENST00000559216 TSPOAP1O95153 1857 aa11.59□□□□□ -0.55
TCF12-211ENST00000559216 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
TCF12-211ENST00000559216 PPRC1Q5VV67 1664 aaKnown RBP11.59□□□□□ -0.55
TCF12-211ENST00000559216 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
TCF12-211ENST00000559216 ABCA5Q8WWZ7 1642 aa11.56□□□□□ -0.56
TCF12-211ENST00000559216 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
TCF12-211ENST00000559216 SOCS7O14512 581 aa11.53□□□□□ -0.56
TCF12-211ENST00000559216 NUP160Q12769 1436 aa11.52□□□□□ -0.57
TCF12-211ENST00000559216 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
TCF12-211ENST00000559216 CHMP7Q8WUX9 453 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms