RNA–Protein interactions for RNA: ENST00000559170.1

PEX11A-203, Transcript of peroxisomal biogenesis factor 11 alpha, humanhuman

TSL 2 BASIC

Gene PEX11A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11A-203ENST00000559170 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
PEX11A-203ENST00000559170 ABCC9O60706 1549 aa24.34■■□□□ 1.49
PEX11A-203ENST00000559170 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
PEX11A-203ENST00000559170 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
PEX11A-203ENST00000559170 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
PEX11A-203ENST00000559170 NACADO15069 1562 aa22.98■■□□□ 1.27
PEX11A-203ENST00000559170 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
PEX11A-203ENST00000559170 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
PEX11A-203ENST00000559170 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
PEX11A-203ENST00000559170 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
PEX11A-203ENST00000559170 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
PEX11A-203ENST00000559170 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
PEX11A-203ENST00000559170 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
PEX11A-203ENST00000559170 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
PEX11A-203ENST00000559170 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
PEX11A-203ENST00000559170 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.11
PEX11A-203ENST00000559170 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
PEX11A-203ENST00000559170 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
PEX11A-203ENST00000559170 DNAJC5Q9H3Z4 198 aa21.47■■□□□ 1.03
PEX11A-203ENST00000559170 CUX2O14529 1486 aa21.24■□□□□ 0.99
PEX11A-203ENST00000559170 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
PEX11A-203ENST00000559170 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
PEX11A-203ENST00000559170 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
PEX11A-203ENST00000559170 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
PEX11A-203ENST00000559170 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
PEX11A-203ENST00000559170 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
PEX11A-203ENST00000559170 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
PEX11A-203ENST00000559170 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
PEX11A-203ENST00000559170 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
PEX11A-203ENST00000559170 NESP48681 1621 aa20.79■□□□□ 0.92
PEX11A-203ENST00000559170 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
PEX11A-203ENST00000559170 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
PEX11A-203ENST00000559170 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
PEX11A-203ENST00000559170 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
PEX11A-203ENST00000559170 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
PEX11A-203ENST00000559170 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
PEX11A-203ENST00000559170 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
PEX11A-203ENST00000559170 WDR62O43379 1518 aa20.41■□□□□ 0.86
PEX11A-203ENST00000559170 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
PEX11A-203ENST00000559170 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.85
PEX11A-203ENST00000559170 WIZO95785 1651 aa20.31■□□□□ 0.84
PEX11A-203ENST00000559170 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
PEX11A-203ENST00000559170 CFTRP13569 1480 aa20.22■□□□□ 0.83
PEX11A-203ENST00000559170 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
PEX11A-203ENST00000559170 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
PEX11A-203ENST00000559170 RSF1Q96T23 1441 aaPredicted RBP20.07■□□□□ 0.8
PEX11A-203ENST00000559170 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
PEX11A-203ENST00000559170 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
PEX11A-203ENST00000559170 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
PEX11A-203ENST00000559170 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
PEX11A-203ENST00000559170 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
PEX11A-203ENST00000559170 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
PEX11A-203ENST00000559170 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
PEX11A-203ENST00000559170 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
PEX11A-203ENST00000559170 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
PEX11A-203ENST00000559170 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
PEX11A-203ENST00000559170 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
PEX11A-203ENST00000559170 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
PEX11A-203ENST00000559170 EIF4G3O43432 1585 aaKnown RBP19.75■□□□□ 0.75
PEX11A-203ENST00000559170 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
PEX11A-203ENST00000559170 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
PEX11A-203ENST00000559170 CHD1O14646 1710 aa19.65■□□□□ 0.74
PEX11A-203ENST00000559170 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
PEX11A-203ENST00000559170 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
PEX11A-203ENST00000559170 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
PEX11A-203ENST00000559170 FBLN2P98095 1184 aa19.6■□□□□ 0.73
PEX11A-203ENST00000559170 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
PEX11A-203ENST00000559170 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
PEX11A-203ENST00000559170 SOGA1O94964 1423 aa19.55■□□□□ 0.72
PEX11A-203ENST00000559170 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
PEX11A-203ENST00000559170 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
PEX11A-203ENST00000559170 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
PEX11A-203ENST00000559170 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
PEX11A-203ENST00000559170 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
PEX11A-203ENST00000559170 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
PEX11A-203ENST00000559170 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
PEX11A-203ENST00000559170 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
PEX11A-203ENST00000559170 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
PEX11A-203ENST00000559170 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
PEX11A-203ENST00000559170 CUX1P39880 1505 aa19.34■□□□□ 0.69
PEX11A-203ENST00000559170 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
PEX11A-203ENST00000559170 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
PEX11A-203ENST00000559170 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
PEX11A-203ENST00000559170 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
PEX11A-203ENST00000559170 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
PEX11A-203ENST00000559170 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
PEX11A-203ENST00000559170 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
PEX11A-203ENST00000559170 NUP160Q12769 1436 aa19.09■□□□□ 0.65
PEX11A-203ENST00000559170 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
PEX11A-203ENST00000559170 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
PEX11A-203ENST00000559170 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
PEX11A-203ENST00000559170 SHROOM2Q13796 1616 aa19.04■□□□□ 0.64
PEX11A-203ENST00000559170 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
PEX11A-203ENST00000559170 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
PEX11A-203ENST00000559170 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
PEX11A-203ENST00000559170 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
PEX11A-203ENST00000559170 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
PEX11A-203ENST00000559170 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
PEX11A-203ENST00000559170 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
PEX11A-203ENST00000559170 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms