RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
RORA-208ENST00000558904 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
RORA-208ENST00000558904 ABCC9O60706 1549 aa20.7■□□□□ 0.9
RORA-208ENST00000558904 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
RORA-208ENST00000558904 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
RORA-208ENST00000558904 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
RORA-208ENST00000558904 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
RORA-208ENST00000558904 NACADO15069 1562 aa19.34■□□□□ 0.69
RORA-208ENST00000558904 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
RORA-208ENST00000558904 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
RORA-208ENST00000558904 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
RORA-208ENST00000558904 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
RORA-208ENST00000558904 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
RORA-208ENST00000558904 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
RORA-208ENST00000558904 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
RORA-208ENST00000558904 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
RORA-208ENST00000558904 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
RORA-208ENST00000558904 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
RORA-208ENST00000558904 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
RORA-208ENST00000558904 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
RORA-208ENST00000558904 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.56
RORA-208ENST00000558904 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
RORA-208ENST00000558904 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
RORA-208ENST00000558904 CUX2O14529 1486 aa18.1■□□□□ 0.49
RORA-208ENST00000558904 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
RORA-208ENST00000558904 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
RORA-208ENST00000558904 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
RORA-208ENST00000558904 FOXD1Q16676 465 aa17.7■□□□□ 0.42
RORA-208ENST00000558904 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
RORA-208ENST00000558904 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
RORA-208ENST00000558904 NESP48681 1621 aa17.61■□□□□ 0.41
RORA-208ENST00000558904 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
RORA-208ENST00000558904 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
RORA-208ENST00000558904 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
RORA-208ENST00000558904 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.39
RORA-208ENST00000558904 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
RORA-208ENST00000558904 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
RORA-208ENST00000558904 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
RORA-208ENST00000558904 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
RORA-208ENST00000558904 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
RORA-208ENST00000558904 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
RORA-208ENST00000558904 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
RORA-208ENST00000558904 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
RORA-208ENST00000558904 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
RORA-208ENST00000558904 WDR62O43379 1518 aa17.23■□□□□ 0.35
RORA-208ENST00000558904 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
RORA-208ENST00000558904 CEP164Q9UPV0 1460 aa17.14■□□□□ 0.33
RORA-208ENST00000558904 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
RORA-208ENST00000558904 CFTRP13569 1480 aa16.99■□□□□ 0.31
RORA-208ENST00000558904 WIZO95785 1651 aa16.95■□□□□ 0.3
RORA-208ENST00000558904 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
RORA-208ENST00000558904 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
RORA-208ENST00000558904 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
RORA-208ENST00000558904 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
RORA-208ENST00000558904 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
RORA-208ENST00000558904 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
RORA-208ENST00000558904 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
RORA-208ENST00000558904 IFT140Q96RY7 1462 aa16.84■□□□□ 0.29
RORA-208ENST00000558904 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
RORA-208ENST00000558904 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
RORA-208ENST00000558904 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
RORA-208ENST00000558904 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
RORA-208ENST00000558904 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
RORA-208ENST00000558904 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
RORA-208ENST00000558904 FBLN2P98095 1184 aa16.66■□□□□ 0.26
RORA-208ENST00000558904 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
RORA-208ENST00000558904 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
RORA-208ENST00000558904 MSH5O43196 834 aa16.6■□□□□ 0.25
RORA-208ENST00000558904 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
RORA-208ENST00000558904 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
RORA-208ENST00000558904 CHD1O14646 1710 aa16.59■□□□□ 0.25
RORA-208ENST00000558904 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
RORA-208ENST00000558904 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
RORA-208ENST00000558904 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
RORA-208ENST00000558904 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
RORA-208ENST00000558904 SOGA1O94964 1423 aa16.45■□□□□ 0.22
RORA-208ENST00000558904 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
RORA-208ENST00000558904 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
RORA-208ENST00000558904 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
RORA-208ENST00000558904 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
RORA-208ENST00000558904 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
RORA-208ENST00000558904 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
RORA-208ENST00000558904 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
RORA-208ENST00000558904 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
RORA-208ENST00000558904 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
RORA-208ENST00000558904 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
RORA-208ENST00000558904 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
RORA-208ENST00000558904 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
RORA-208ENST00000558904 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
RORA-208ENST00000558904 CUX1P39880 1505 aa16.19■□□□□ 0.18
RORA-208ENST00000558904 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
RORA-208ENST00000558904 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
RORA-208ENST00000558904 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
RORA-208ENST00000558904 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
RORA-208ENST00000558904 NUP160Q12769 1436 aa16.08■□□□□ 0.16
RORA-208ENST00000558904 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
RORA-208ENST00000558904 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
RORA-208ENST00000558904 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
RORA-208ENST00000558904 ADRA2BP18089 450 aa16.06■□□□□ 0.16
RORA-208ENST00000558904 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms