RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 NISCHQ9Y2I1 1504 aa40.19■■■■■ 4.02
CDC42BPB-203ENST00000558867 ABCC9O60706 1549 aa36.52■■■■□ 3.44
CDC42BPB-203ENST00000558867 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
CDC42BPB-203ENST00000558867 RB1CC1Q8TDY2 1594 aa34.7■■■■□ 3.14
CDC42BPB-203ENST00000558867 DNAJC5BQ9UF47 199 aa34.47■■■■□ 3.11
CDC42BPB-203ENST00000558867 NACADO15069 1562 aa34.37■■■■□ 3.09
CDC42BPB-203ENST00000558867 DCAF8L2P0C7V8 631 aa34.2■■■■□ 3.07
CDC42BPB-203ENST00000558867 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
CDC42BPB-203ENST00000558867 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
CDC42BPB-203ENST00000558867 UNC13AQ9UPW8 1703 aa33.74■■■□□ 2.99
CDC42BPB-203ENST00000558867 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
CDC42BPB-203ENST00000558867 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
CDC42BPB-203ENST00000558867 DCAF1Q9Y4B6 1507 aa33.22■■■□□ 2.91
CDC42BPB-203ENST00000558867 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
CDC42BPB-203ENST00000558867 CECR2Q9BXF3 1484 aa32.98■■■□□ 2.87
CDC42BPB-203ENST00000558867 CC2D2AQ9P2K1 1620 aa32.97■■■□□ 2.87
CDC42BPB-203ENST00000558867 SCRIBQ14160 1630 aa32.95■■■□□ 2.86
CDC42BPB-203ENST00000558867 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
CDC42BPB-203ENST00000558867 DNAJC5Q9H3Z4 198 aa32.03■■■□□ 2.72
CDC42BPB-203ENST00000558867 NCAPD3P42695 1498 aa31.71■■■□□ 2.67
CDC42BPB-203ENST00000558867 CUX2O14529 1486 aa31.69■■■□□ 2.66
CDC42BPB-203ENST00000558867 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
CDC42BPB-203ENST00000558867 ATAD2BQ9ULI0 1458 aa31.53■■■□□ 2.64
CDC42BPB-203ENST00000558867 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
CDC42BPB-203ENST00000558867 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
CDC42BPB-203ENST00000558867 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
CDC42BPB-203ENST00000558867 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
CDC42BPB-203ENST00000558867 BAZ1BQ9UIG0 1483 aaKnown RBP31.27■■■□□ 2.6
CDC42BPB-203ENST00000558867 NESP48681 1621 aa31.23■■■□□ 2.59
CDC42BPB-203ENST00000558867 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
CDC42BPB-203ENST00000558867 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
CDC42BPB-203ENST00000558867 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
CDC42BPB-203ENST00000558867 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
CDC42BPB-203ENST00000558867 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
CDC42BPB-203ENST00000558867 KIF21AQ7Z4S6 1674 aa30.82■■■□□ 2.52
CDC42BPB-203ENST00000558867 CADPSQ9ULU8 1353 aa30.76■■■□□ 2.51
CDC42BPB-203ENST00000558867 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
CDC42BPB-203ENST00000558867 WDR62O43379 1518 aa30.53■■■□□ 2.48
CDC42BPB-203ENST00000558867 WIZO95785 1651 aa30.52■■■□□ 2.48
CDC42BPB-203ENST00000558867 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
CDC42BPB-203ENST00000558867 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
CDC42BPB-203ENST00000558867 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
CDC42BPB-203ENST00000558867 CFTRP13569 1480 aa30.31■■■□□ 2.44
CDC42BPB-203ENST00000558867 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
CDC42BPB-203ENST00000558867 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
CDC42BPB-203ENST00000558867 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
CDC42BPB-203ENST00000558867 URB2Q14146 1524 aaKnown RBP30.08■■■□□ 2.41
CDC42BPB-203ENST00000558867 PRDM2Q13029 1718 aa29.94■■■□□ 2.38
CDC42BPB-203ENST00000558867 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
CDC42BPB-203ENST00000558867 CCDC88BA6NC98 1476 aa29.82■■■□□ 2.36
CDC42BPB-203ENST00000558867 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
CDC42BPB-203ENST00000558867 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
CDC42BPB-203ENST00000558867 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
CDC42BPB-203ENST00000558867 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
CDC42BPB-203ENST00000558867 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
CDC42BPB-203ENST00000558867 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
CDC42BPB-203ENST00000558867 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
CDC42BPB-203ENST00000558867 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
CDC42BPB-203ENST00000558867 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
CDC42BPB-203ENST00000558867 CYB5RLQ6IPT4 315 aa29.53■■■□□ 2.32
CDC42BPB-203ENST00000558867 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.31
CDC42BPB-203ENST00000558867 FBLN2P98095 1184 aa29.49■■■□□ 2.31
CDC42BPB-203ENST00000558867 TARBP1Q13395 1621 aaKnown RBP29.47■■■□□ 2.31
CDC42BPB-203ENST00000558867 CHD1O14646 1710 aa29.43■■■□□ 2.3
CDC42BPB-203ENST00000558867 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
CDC42BPB-203ENST00000558867 TRHP20396 242 aaPredicted RBP29.37■■■□□ 2.29
CDC42BPB-203ENST00000558867 SOGA1O94964 1423 aa29.34■■■□□ 2.29
CDC42BPB-203ENST00000558867 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
CDC42BPB-203ENST00000558867 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
CDC42BPB-203ENST00000558867 TDRD9Q8NDG6 1382 aaKnown RBP29.28■■■□□ 2.28
CDC42BPB-203ENST00000558867 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
CDC42BPB-203ENST00000558867 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
CDC42BPB-203ENST00000558867 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
CDC42BPB-203ENST00000558867 FGD5Q6ZNL6 1462 aa29.19■■■□□ 2.26
CDC42BPB-203ENST00000558867 MAGI1Q96QZ7 1491 aaPredicted RBP29.16■■■□□ 2.26
CDC42BPB-203ENST00000558867 SYNJ1O43426 1573 aa29.15■■■□□ 2.26
CDC42BPB-203ENST00000558867 GRIN2BQ13224 1484 aa29.13■■■□□ 2.25
CDC42BPB-203ENST00000558867 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
CDC42BPB-203ENST00000558867 CUX1P39880 1505 aa29.07■■■□□ 2.24
CDC42BPB-203ENST00000558867 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
CDC42BPB-203ENST00000558867 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
CDC42BPB-203ENST00000558867 PBRM1Q86U86 1689 aa28.91■■■□□ 2.22
CDC42BPB-203ENST00000558867 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
CDC42BPB-203ENST00000558867 AEBP2Q6ZN18 517 aaPredicted RBP28.82■■■□□ 2.2
CDC42BPB-203ENST00000558867 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
CDC42BPB-203ENST00000558867 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
CDC42BPB-203ENST00000558867 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
CDC42BPB-203ENST00000558867 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
CDC42BPB-203ENST00000558867 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
CDC42BPB-203ENST00000558867 NUP160Q12769 1436 aa28.61■■■□□ 2.17
CDC42BPB-203ENST00000558867 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
CDC42BPB-203ENST00000558867 CEP170Q5SW79 1584 aa28.58■■■□□ 2.17
CDC42BPB-203ENST00000558867 TOP2BQ02880 1626 aa28.56■■■□□ 2.16
CDC42BPB-203ENST00000558867 ERCC6L2Q5T890 1561 aa28.55■■■□□ 2.16
CDC42BPB-203ENST00000558867 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
CDC42BPB-203ENST00000558867 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
CDC42BPB-203ENST00000558867 SHROOM2Q13796 1616 aa28.49■■■□□ 2.15
CDC42BPB-203ENST00000558867 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
CDC42BPB-203ENST00000558867 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
CDC42BPB-203ENST00000558867 NPM1P06748 294 aaKnown RBP eCLIP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms