RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 NISCHQ9Y2I1 1504 aa37.64■■■■□ 3.62
IDH3A-205ENST00000558509 CCDC180Q9P1Z9 1646 aa33.8■■■■□ 3
IDH3A-205ENST00000558509 ABCC9O60706 1549 aa33.75■■■□□ 2.99
IDH3A-205ENST00000558509 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
IDH3A-205ENST00000558509 NACADO15069 1562 aa31.85■■■□□ 2.69
IDH3A-205ENST00000558509 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
IDH3A-205ENST00000558509 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
IDH3A-205ENST00000558509 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
IDH3A-205ENST00000558509 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
IDH3A-205ENST00000558509 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.61
IDH3A-205ENST00000558509 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
IDH3A-205ENST00000558509 ZCCHC6Q5VYS8 1495 aaKnown RBP31.24■■■□□ 2.59
IDH3A-205ENST00000558509 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
IDH3A-205ENST00000558509 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
IDH3A-205ENST00000558509 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
IDH3A-205ENST00000558509 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
IDH3A-205ENST00000558509 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.46
IDH3A-205ENST00000558509 CECR2Q9BXF3 1484 aa30.34■■■□□ 2.45
IDH3A-205ENST00000558509 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
IDH3A-205ENST00000558509 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
IDH3A-205ENST00000558509 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
IDH3A-205ENST00000558509 SMARCA2P51531 1590 aa29.24■■■□□ 2.27
IDH3A-205ENST00000558509 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
IDH3A-205ENST00000558509 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
IDH3A-205ENST00000558509 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
IDH3A-205ENST00000558509 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
IDH3A-205ENST00000558509 NESP48681 1621 aa29.06■■■□□ 2.24
IDH3A-205ENST00000558509 BAZ1BQ9UIG0 1483 aaKnown RBP29.05■■■□□ 2.24
IDH3A-205ENST00000558509 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
IDH3A-205ENST00000558509 CUX2O14529 1486 aa28.97■■■□□ 2.23
IDH3A-205ENST00000558509 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
IDH3A-205ENST00000558509 THOC2Q8NI27 1593 aaKnown RBP28.79■■■□□ 2.2
IDH3A-205ENST00000558509 WIZO95785 1651 aa28.77■■■□□ 2.2
IDH3A-205ENST00000558509 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
IDH3A-205ENST00000558509 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
IDH3A-205ENST00000558509 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
IDH3A-205ENST00000558509 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
IDH3A-205ENST00000558509 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
IDH3A-205ENST00000558509 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
IDH3A-205ENST00000558509 WDR62O43379 1518 aa28.33■■■□□ 2.13
IDH3A-205ENST00000558509 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
IDH3A-205ENST00000558509 CEP164Q9UPV0 1460 aa28.23■■■□□ 2.11
IDH3A-205ENST00000558509 CFTRP13569 1480 aa28.21■■■□□ 2.11
IDH3A-205ENST00000558509 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
IDH3A-205ENST00000558509 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
IDH3A-205ENST00000558509 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
IDH3A-205ENST00000558509 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
IDH3A-205ENST00000558509 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
IDH3A-205ENST00000558509 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
IDH3A-205ENST00000558509 TRIM41Q8WV44 630 aa27.65■■■□□ 2.02
IDH3A-205ENST00000558509 IFT140Q96RY7 1462 aa27.64■■■□□ 2.01
IDH3A-205ENST00000558509 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
IDH3A-205ENST00000558509 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
IDH3A-205ENST00000558509 OSCARQ8IYS5 282 aa27.55■■■□□ 2
IDH3A-205ENST00000558509 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
IDH3A-205ENST00000558509 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
IDH3A-205ENST00000558509 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
IDH3A-205ENST00000558509 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
IDH3A-205ENST00000558509 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
IDH3A-205ENST00000558509 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
IDH3A-205ENST00000558509 CHD1O14646 1710 aa27.42■■□□□ 1.98
IDH3A-205ENST00000558509 AQRO60306 1485 aaKnown RBP eCLIP27.4■■□□□ 1.98
IDH3A-205ENST00000558509 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
IDH3A-205ENST00000558509 CUX1P39880 1505 aa27.31■■□□□ 1.96
IDH3A-205ENST00000558509 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
IDH3A-205ENST00000558509 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
IDH3A-205ENST00000558509 SOGA1O94964 1423 aa27.22■■□□□ 1.95
IDH3A-205ENST00000558509 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
IDH3A-205ENST00000558509 TDRD9Q8NDG6 1382 aaKnown RBP27.21■■□□□ 1.95
IDH3A-205ENST00000558509 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
IDH3A-205ENST00000558509 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
IDH3A-205ENST00000558509 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
IDH3A-205ENST00000558509 FBLN2P98095 1184 aa27.08■■□□□ 1.93
IDH3A-205ENST00000558509 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
IDH3A-205ENST00000558509 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
IDH3A-205ENST00000558509 CLASP1Q7Z460 1538 aa27.05■■□□□ 1.92
IDH3A-205ENST00000558509 GRIN2BQ13224 1484 aa27■■□□□ 1.91
IDH3A-205ENST00000558509 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
IDH3A-205ENST00000558509 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
IDH3A-205ENST00000558509 CYB5RLQ6IPT4 315 aa26.96■■□□□ 1.91
IDH3A-205ENST00000558509 ABCA10Q8WWZ4 1543 aa26.94■■□□□ 1.9
IDH3A-205ENST00000558509 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
IDH3A-205ENST00000558509 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
IDH3A-205ENST00000558509 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
IDH3A-205ENST00000558509 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
IDH3A-205ENST00000558509 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
IDH3A-205ENST00000558509 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
IDH3A-205ENST00000558509 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
IDH3A-205ENST00000558509 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
IDH3A-205ENST00000558509 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
IDH3A-205ENST00000558509 GRIN2AQ12879 1464 aa26.7■■□□□ 1.87
IDH3A-205ENST00000558509 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
IDH3A-205ENST00000558509 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
IDH3A-205ENST00000558509 NUP160Q12769 1436 aa26.61■■□□□ 1.85
IDH3A-205ENST00000558509 TRHP20396 242 aaPredicted RBP26.6■■□□□ 1.85
IDH3A-205ENST00000558509 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
IDH3A-205ENST00000558509 SHROOM2Q13796 1616 aa26.57■■□□□ 1.84
IDH3A-205ENST00000558509 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
IDH3A-205ENST00000558509 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
IDH3A-205ENST00000558509 PRG4Q92954 1404 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 459 ms