RNA–Protein interactions for RNA: ENST00000558496.5

CRTC3-205, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 543 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-205ENST00000558496 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
CRTC3-205ENST00000558496 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
CRTC3-205ENST00000558496 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
CRTC3-205ENST00000558496 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
CRTC3-205ENST00000558496 ABCC9O60706 1549 aa12.27□□□□□ -0.45
CRTC3-205ENST00000558496 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-205ENST00000558496 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
CRTC3-205ENST00000558496 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
CRTC3-205ENST00000558496 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
CRTC3-205ENST00000558496 FOXD1Q16676 465 aa11.49□□□□□ -0.57
CRTC3-205ENST00000558496 NACADO15069 1562 aa11.37□□□□□ -0.59
CRTC3-205ENST00000558496 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
CRTC3-205ENST00000558496 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
CRTC3-205ENST00000558496 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
CRTC3-205ENST00000558496 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
CRTC3-205ENST00000558496 MYO15BQ96JP2 1530 aa11.1□□□□□ -0.63
CRTC3-205ENST00000558496 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
CRTC3-205ENST00000558496 POTEDQ86YR6 584 aa11.07□□□□□ -0.64
CRTC3-205ENST00000558496 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
CRTC3-205ENST00000558496 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
CRTC3-205ENST00000558496 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
CRTC3-205ENST00000558496 EIF4G1Q04637 1599 aaKnown RBP10.98□□□□□ -0.65
CRTC3-205ENST00000558496 MSH5O43196 834 aa10.92□□□□□ -0.66
CRTC3-205ENST00000558496 SCRIBQ14160 1630 aa10.9□□□□□ -0.66
CRTC3-205ENST00000558496 ZCCHC6Q5VYS8 1495 aaKnown RBP10.86□□□□□ -0.67
CRTC3-205ENST00000558496 DCAF1Q9Y4B6 1507 aa10.85□□□□□ -0.67
CRTC3-205ENST00000558496 CUX2O14529 1486 aa10.68□□□□□ -0.7
CRTC3-205ENST00000558496 PIAS4Q8N2W9 510 aaPredicted RBP10.65□□□□□ -0.7
CRTC3-205ENST00000558496 PLPPR3Q6T4P5 718 aa10.61□□□□□ -0.71
CRTC3-205ENST00000558496 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
CRTC3-205ENST00000558496 PPP6R1Q9UPN7 881 aa10.52□□□□□ -0.73
CRTC3-205ENST00000558496 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
CRTC3-205ENST00000558496 NESP48681 1621 aa10.46□□□□□ -0.74
CRTC3-205ENST00000558496 ADRA2BP18089 450 aa10.45□□□□□ -0.74
CRTC3-205ENST00000558496 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
CRTC3-205ENST00000558496 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
CRTC3-205ENST00000558496 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
CRTC3-205ENST00000558496 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
CRTC3-205ENST00000558496 SMARCA2P51531 1590 aa10.38□□□□□ -0.75
CRTC3-205ENST00000558496 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
CRTC3-205ENST00000558496 KIF21AQ7Z4S6 1674 aa10.35□□□□□ -0.75
CRTC3-205ENST00000558496 LAMC3Q9Y6N6 1575 aa10.32□□□□□ -0.76
CRTC3-205ENST00000558496 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
CRTC3-205ENST00000558496 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
CRTC3-205ENST00000558496 BAZ1AQ9NRL2 1556 aaPredicted RBP10.24□□□□□ -0.77
CRTC3-205ENST00000558496 PDS5BQ9NTI5 1447 aa10.23□□□□□ -0.77
CRTC3-205ENST00000558496 WDR62O43379 1518 aa10.21□□□□□ -0.78
CRTC3-205ENST00000558496 MRC2Q9UBG0 1479 aa10.19□□□□□ -0.78
CRTC3-205ENST00000558496 MROH2BQ7Z745 1585 aa10.15□□□□□ -0.78
CRTC3-205ENST00000558496 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
CRTC3-205ENST00000558496 RIMBP3CA6NJZ7 1639 aa10.09□□□□□ -0.79
CRTC3-205ENST00000558496 RIMBP3BA6NNM3 1639 aa10.09□□□□□ -0.79
CRTC3-205ENST00000558496 RIMBP3Q9UFD9 1639 aa10.09□□□□□ -0.79
CRTC3-205ENST00000558496 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
CRTC3-205ENST00000558496 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
CRTC3-205ENST00000558496 FANCD2Q9BXW9 1451 aa10.04□□□□□ -0.8
CRTC3-205ENST00000558496 WIZO95785 1651 aa10.04□□□□□ -0.8
CRTC3-205ENST00000558496 URB2Q14146 1524 aaKnown RBP10.01□□□□□ -0.81
CRTC3-205ENST00000558496 ARHGEF11O15085 1522 aa10□□□□□ -0.81
CRTC3-205ENST00000558496 CFTRP13569 1480 aa9.98□□□□□ -0.81
CRTC3-205ENST00000558496 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
CRTC3-205ENST00000558496 ZNF608Q9ULD9 1512 aaPredicted RBP9.93□□□□□ -0.82
CRTC3-205ENST00000558496 CHD1O14646 1710 aa9.9□□□□□ -0.83
CRTC3-205ENST00000558496 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
CRTC3-205ENST00000558496 CYB5RLQ6IPT4 315 aa9.89□□□□□ -0.83
CRTC3-205ENST00000558496 ARAP1Q96P48 1450 aa9.89□□□□□ -0.83
CRTC3-205ENST00000558496 IFT140Q96RY7 1462 aa9.89□□□□□ -0.83
CRTC3-205ENST00000558496 TRHP20396 242 aaPredicted RBP9.87□□□□□ -0.83
CRTC3-205ENST00000558496 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
CRTC3-205ENST00000558496 TOPBP1Q92547 1522 aa9.83□□□□□ -0.84
CRTC3-205ENST00000558496 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
CRTC3-205ENST00000558496 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
CRTC3-205ENST00000558496 DNMBPQ6XZF7 1577 aa9.78□□□□□ -0.84
CRTC3-205ENST00000558496 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
CRTC3-205ENST00000558496 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
CRTC3-205ENST00000558496 CLASP1Q7Z460 1538 aa9.75□□□□□ -0.85
CRTC3-205ENST00000558496 CCDC88BA6NC98 1476 aa9.74□□□□□ -0.85
CRTC3-205ENST00000558496 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
CRTC3-205ENST00000558496 FBLN2P98095 1184 aa9.73□□□□□ -0.85
CRTC3-205ENST00000558496 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.86
CRTC3-205ENST00000558496 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
CRTC3-205ENST00000558496 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
CRTC3-205ENST00000558496 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
CRTC3-205ENST00000558496 RAD54L2Q9Y4B4 1467 aa9.68□□□□□ -0.86
CRTC3-205ENST00000558496 MAPK8IP2Q13387 824 aaPredicted RBP9.68□□□□□ -0.86
CRTC3-205ENST00000558496 TDRD9Q8NDG6 1382 aaKnown RBP9.65□□□□□ -0.86
CRTC3-205ENST00000558496 WDR97A6NE52 1622 aa9.65□□□□□ -0.86
CRTC3-205ENST00000558496 MAGI1Q96QZ7 1491 aaPredicted RBP9.64□□□□□ -0.87
CRTC3-205ENST00000558496 GAPVD1Q14C86 1478 aa9.63□□□□□ -0.87
CRTC3-205ENST00000558496 SOGA1O94964 1423 aa9.63□□□□□ -0.87
CRTC3-205ENST00000558496 FGD5Q6ZNL6 1462 aa9.61□□□□□ -0.87
CRTC3-205ENST00000558496 CHMP7Q8WUX9 453 aaPredicted RBP9.61□□□□□ -0.87
CRTC3-205ENST00000558496 PBRM1Q86U86 1689 aa9.61□□□□□ -0.87
CRTC3-205ENST00000558496 SYNJ2O15056 1496 aa9.6□□□□□ -0.87
CRTC3-205ENST00000558496 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
CRTC3-205ENST00000558496 KIF13AQ9H1H9 1805 aa9.58□□□□□ -0.88
CRTC3-205ENST00000558496 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
CRTC3-205ENST00000558496 CUX1P39880 1505 aa9.56□□□□□ -0.88
CRTC3-205ENST00000558496 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
CRTC3-205ENST00000558496 CEP170Q5SW79 1584 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms