RNA–Protein interactions for RNA: ENST00000558438.1

TTC23-213, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 2

Gene TTC23, Length 424 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-213ENST00000558438 NISCHQ9Y2I1 1504 aa32.47■■■□□ 2.79
TTC23-213ENST00000558438 ABCC9O60706 1549 aa29.51■■■□□ 2.32
TTC23-213ENST00000558438 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
TTC23-213ENST00000558438 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
TTC23-213ENST00000558438 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
TTC23-213ENST00000558438 NACADO15069 1562 aa27.88■■■□□ 2.05
TTC23-213ENST00000558438 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
TTC23-213ENST00000558438 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
TTC23-213ENST00000558438 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
TTC23-213ENST00000558438 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
TTC23-213ENST00000558438 BICRAQ9NZM4 1560 aa27.11■■□□□ 1.93
TTC23-213ENST00000558438 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
TTC23-213ENST00000558438 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
TTC23-213ENST00000558438 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
TTC23-213ENST00000558438 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
TTC23-213ENST00000558438 CC2D2AQ9P2K1 1620 aa26.66■■□□□ 1.86
TTC23-213ENST00000558438 EIF4G1Q04637 1599 aaKnown RBP26.56■■□□□ 1.84
TTC23-213ENST00000558438 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
TTC23-213ENST00000558438 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
TTC23-213ENST00000558438 CUX2O14529 1486 aa25.8■■□□□ 1.72
TTC23-213ENST00000558438 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
TTC23-213ENST00000558438 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
TTC23-213ENST00000558438 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
TTC23-213ENST00000558438 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
TTC23-213ENST00000558438 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
TTC23-213ENST00000558438 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
TTC23-213ENST00000558438 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
TTC23-213ENST00000558438 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
TTC23-213ENST00000558438 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
TTC23-213ENST00000558438 NESP48681 1621 aa25.19■■□□□ 1.62
TTC23-213ENST00000558438 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
TTC23-213ENST00000558438 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
TTC23-213ENST00000558438 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
TTC23-213ENST00000558438 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
TTC23-213ENST00000558438 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
TTC23-213ENST00000558438 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.56
TTC23-213ENST00000558438 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
TTC23-213ENST00000558438 WDR62O43379 1518 aa24.75■■□□□ 1.55
TTC23-213ENST00000558438 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
TTC23-213ENST00000558438 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
TTC23-213ENST00000558438 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
TTC23-213ENST00000558438 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
TTC23-213ENST00000558438 CFTRP13569 1480 aa24.55■■□□□ 1.52
TTC23-213ENST00000558438 WIZO95785 1651 aa24.52■■□□□ 1.52
TTC23-213ENST00000558438 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
TTC23-213ENST00000558438 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
TTC23-213ENST00000558438 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
TTC23-213ENST00000558438 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
TTC23-213ENST00000558438 ABCC8Q09428 1581 aa24.2■■□□□ 1.46
TTC23-213ENST00000558438 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
TTC23-213ENST00000558438 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
TTC23-213ENST00000558438 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
TTC23-213ENST00000558438 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
TTC23-213ENST00000558438 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
TTC23-213ENST00000558438 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
TTC23-213ENST00000558438 ARHGEF11O15085 1522 aa24.03■■□□□ 1.44
TTC23-213ENST00000558438 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
TTC23-213ENST00000558438 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
TTC23-213ENST00000558438 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
TTC23-213ENST00000558438 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
TTC23-213ENST00000558438 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
TTC23-213ENST00000558438 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
TTC23-213ENST00000558438 FBLN2P98095 1184 aa23.81■■□□□ 1.4
TTC23-213ENST00000558438 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
TTC23-213ENST00000558438 POLA1P09884 1462 aaPredicted RBP23.77■■□□□ 1.4
TTC23-213ENST00000558438 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
TTC23-213ENST00000558438 SOGA1O94964 1423 aa23.74■■□□□ 1.39
TTC23-213ENST00000558438 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
TTC23-213ENST00000558438 CHD1O14646 1710 aa23.7■■□□□ 1.39
TTC23-213ENST00000558438 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
TTC23-213ENST00000558438 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
TTC23-213ENST00000558438 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
TTC23-213ENST00000558438 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
TTC23-213ENST00000558438 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
TTC23-213ENST00000558438 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
TTC23-213ENST00000558438 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
TTC23-213ENST00000558438 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
TTC23-213ENST00000558438 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
TTC23-213ENST00000558438 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
TTC23-213ENST00000558438 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
TTC23-213ENST00000558438 CUX1P39880 1505 aa23.43■■□□□ 1.34
TTC23-213ENST00000558438 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
TTC23-213ENST00000558438 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
TTC23-213ENST00000558438 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
TTC23-213ENST00000558438 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
TTC23-213ENST00000558438 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
TTC23-213ENST00000558438 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
TTC23-213ENST00000558438 NUP160Q12769 1436 aa23.18■■□□□ 1.3
TTC23-213ENST00000558438 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
TTC23-213ENST00000558438 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
TTC23-213ENST00000558438 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
TTC23-213ENST00000558438 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
TTC23-213ENST00000558438 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
TTC23-213ENST00000558438 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
TTC23-213ENST00000558438 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
TTC23-213ENST00000558438 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
TTC23-213ENST00000558438 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
TTC23-213ENST00000558438 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
TTC23-213ENST00000558438 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
TTC23-213ENST00000558438 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms