RNA–Protein interactions for RNA: ENST00000558270.1

INO80-204, Transcript of INO80 complex subunit, humanhuman

TSL 2

Gene INO80, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-204ENST00000558270 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
INO80-204ENST00000558270 ABCC9O60706 1549 aa26.33■■□□□ 1.81
INO80-204ENST00000558270 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
INO80-204ENST00000558270 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
INO80-204ENST00000558270 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
INO80-204ENST00000558270 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
INO80-204ENST00000558270 NACADO15069 1562 aa24.37■■□□□ 1.49
INO80-204ENST00000558270 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
INO80-204ENST00000558270 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
INO80-204ENST00000558270 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
INO80-204ENST00000558270 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
INO80-204ENST00000558270 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
INO80-204ENST00000558270 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
INO80-204ENST00000558270 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
INO80-204ENST00000558270 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
INO80-204ENST00000558270 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
INO80-204ENST00000558270 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
INO80-204ENST00000558270 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
INO80-204ENST00000558270 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
INO80-204ENST00000558270 CUX2O14529 1486 aa22.98■■□□□ 1.27
INO80-204ENST00000558270 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
INO80-204ENST00000558270 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
INO80-204ENST00000558270 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
INO80-204ENST00000558270 NESP48681 1621 aa22.38■■□□□ 1.17
INO80-204ENST00000558270 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
INO80-204ENST00000558270 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
INO80-204ENST00000558270 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
INO80-204ENST00000558270 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
INO80-204ENST00000558270 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
INO80-204ENST00000558270 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
INO80-204ENST00000558270 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
INO80-204ENST00000558270 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
INO80-204ENST00000558270 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
INO80-204ENST00000558270 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
INO80-204ENST00000558270 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
INO80-204ENST00000558270 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
INO80-204ENST00000558270 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
INO80-204ENST00000558270 WDR62O43379 1518 aa21.83■■□□□ 1.09
INO80-204ENST00000558270 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
INO80-204ENST00000558270 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
INO80-204ENST00000558270 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
INO80-204ENST00000558270 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.04
INO80-204ENST00000558270 RIMBP3CA6NJZ7 1639 aa21.57■■□□□ 1.04
INO80-204ENST00000558270 RIMBP3BA6NNM3 1639 aa21.57■■□□□ 1.04
INO80-204ENST00000558270 RIMBP3Q9UFD9 1639 aa21.57■■□□□ 1.04
INO80-204ENST00000558270 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
INO80-204ENST00000558270 TRHP20396 242 aaPredicted RBP21.45■■□□□ 1.02
INO80-204ENST00000558270 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
INO80-204ENST00000558270 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
INO80-204ENST00000558270 CFTRP13569 1480 aa21.4■■□□□ 1.02
INO80-204ENST00000558270 WIZO95785 1651 aa21.38■■□□□ 1.01
INO80-204ENST00000558270 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
INO80-204ENST00000558270 IFT140Q96RY7 1462 aa21.27■■□□□ 1
INO80-204ENST00000558270 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
INO80-204ENST00000558270 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
INO80-204ENST00000558270 FBLN2P98095 1184 aa21.12■□□□□ 0.97
INO80-204ENST00000558270 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
INO80-204ENST00000558270 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
INO80-204ENST00000558270 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
INO80-204ENST00000558270 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
INO80-204ENST00000558270 CHD1O14646 1710 aa21.05■□□□□ 0.96
INO80-204ENST00000558270 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
INO80-204ENST00000558270 ABCC8Q09428 1581 aa21.02■□□□□ 0.95
INO80-204ENST00000558270 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.956e-9■■■■■ 45.1
INO80-204ENST00000558270 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
INO80-204ENST00000558270 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
INO80-204ENST00000558270 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
INO80-204ENST00000558270 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
INO80-204ENST00000558270 CLASP1Q7Z460 1538 aa20.81■□□□□ 0.92
INO80-204ENST00000558270 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
INO80-204ENST00000558270 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
INO80-204ENST00000558270 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
INO80-204ENST00000558270 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
INO80-204ENST00000558270 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
INO80-204ENST00000558270 SOGA1O94964 1423 aa20.74■□□□□ 0.91
INO80-204ENST00000558270 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
INO80-204ENST00000558270 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
INO80-204ENST00000558270 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
INO80-204ENST00000558270 GRIN2BQ13224 1484 aa20.64■□□□□ 0.89
INO80-204ENST00000558270 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
INO80-204ENST00000558270 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
INO80-204ENST00000558270 ILDR1Q86SU0 546 aaPredicted RBP20.45■□□□□ 0.86
INO80-204ENST00000558270 CUX1P39880 1505 aa20.43■□□□□ 0.86
INO80-204ENST00000558270 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
INO80-204ENST00000558270 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
INO80-204ENST00000558270 CEP170Q5SW79 1584 aa20.36■□□□□ 0.85
INO80-204ENST00000558270 GRIN2AQ12879 1464 aa20.36■□□□□ 0.85
INO80-204ENST00000558270 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
INO80-204ENST00000558270 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
INO80-204ENST00000558270 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
INO80-204ENST00000558270 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
INO80-204ENST00000558270 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
INO80-204ENST00000558270 NUP160Q12769 1436 aa20.29■□□□□ 0.84
INO80-204ENST00000558270 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
INO80-204ENST00000558270 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
INO80-204ENST00000558270 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
INO80-204ENST00000558270 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
INO80-204ENST00000558270 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
INO80-204ENST00000558270 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
INO80-204ENST00000558270 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms