RNA–Protein interactions for RNA: ENST00000558217.5

SEC11A-205, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 2

Gene SEC11A, Length 882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-205ENST00000558217 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
SEC11A-205ENST00000558217 AEBP2Q6ZN18 517 aaPredicted RBP32.28■■■□□ 2.76
SEC11A-205ENST00000558217 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
SEC11A-205ENST00000558217 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
SEC11A-205ENST00000558217 ABCC9O60706 1549 aa28.89■■■□□ 2.22
SEC11A-205ENST00000558217 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
SEC11A-205ENST00000558217 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
SEC11A-205ENST00000558217 NACADO15069 1562 aa27.57■■■□□ 2
SEC11A-205ENST00000558217 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
SEC11A-205ENST00000558217 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
SEC11A-205ENST00000558217 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
SEC11A-205ENST00000558217 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
SEC11A-205ENST00000558217 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
SEC11A-205ENST00000558217 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
SEC11A-205ENST00000558217 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
SEC11A-205ENST00000558217 BICRAQ9NZM4 1560 aa26.85■■□□□ 1.89
SEC11A-205ENST00000558217 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
SEC11A-205ENST00000558217 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
SEC11A-205ENST00000558217 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
SEC11A-205ENST00000558217 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
SEC11A-205ENST00000558217 EIF4G1Q04637 1599 aaKnown RBP26.17■■□□□ 1.78
SEC11A-205ENST00000558217 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
SEC11A-205ENST00000558217 FOXD1Q16676 465 aa25.43■■□□□ 1.66
SEC11A-205ENST00000558217 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
SEC11A-205ENST00000558217 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
SEC11A-205ENST00000558217 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
SEC11A-205ENST00000558217 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
SEC11A-205ENST00000558217 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
SEC11A-205ENST00000558217 PLPPR3Q6T4P5 718 aa25.32■■□□□ 1.64
SEC11A-205ENST00000558217 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
SEC11A-205ENST00000558217 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
SEC11A-205ENST00000558217 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
SEC11A-205ENST00000558217 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
SEC11A-205ENST00000558217 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
SEC11A-205ENST00000558217 NESP48681 1621 aa24.89■■□□□ 1.57
SEC11A-205ENST00000558217 CUX2O14529 1486 aa24.88■■□□□ 1.57
SEC11A-205ENST00000558217 WIZO95785 1651 aa24.86■■□□□ 1.57
SEC11A-205ENST00000558217 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
SEC11A-205ENST00000558217 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
SEC11A-205ENST00000558217 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
SEC11A-205ENST00000558217 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
SEC11A-205ENST00000558217 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
SEC11A-205ENST00000558217 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
SEC11A-205ENST00000558217 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
SEC11A-205ENST00000558217 DNAJC5Q9H3Z4 198 aa24.51■■□□□ 1.51
SEC11A-205ENST00000558217 CFTRP13569 1480 aa24.42■■□□□ 1.5
SEC11A-205ENST00000558217 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
SEC11A-205ENST00000558217 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
SEC11A-205ENST00000558217 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
SEC11A-205ENST00000558217 WDR62O43379 1518 aa24.37■■□□□ 1.49
SEC11A-205ENST00000558217 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
SEC11A-205ENST00000558217 ADRA2BP18089 450 aa24.35■■□□□ 1.49
SEC11A-205ENST00000558217 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
SEC11A-205ENST00000558217 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
SEC11A-205ENST00000558217 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
SEC11A-205ENST00000558217 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
SEC11A-205ENST00000558217 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
SEC11A-205ENST00000558217 PIAS4Q8N2W9 510 aaPredicted RBP23.91■■□□□ 1.42
SEC11A-205ENST00000558217 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
SEC11A-205ENST00000558217 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
SEC11A-205ENST00000558217 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
SEC11A-205ENST00000558217 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
SEC11A-205ENST00000558217 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
SEC11A-205ENST00000558217 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
SEC11A-205ENST00000558217 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
SEC11A-205ENST00000558217 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
SEC11A-205ENST00000558217 CUX1P39880 1505 aa23.6■■□□□ 1.37
SEC11A-205ENST00000558217 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.37
SEC11A-205ENST00000558217 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
SEC11A-205ENST00000558217 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
SEC11A-205ENST00000558217 SOGA1O94964 1423 aa23.58■■□□□ 1.36
SEC11A-205ENST00000558217 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
SEC11A-205ENST00000558217 CHD1O14646 1710 aa23.52■■□□□ 1.36
SEC11A-205ENST00000558217 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
SEC11A-205ENST00000558217 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
SEC11A-205ENST00000558217 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
SEC11A-205ENST00000558217 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
SEC11A-205ENST00000558217 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
SEC11A-205ENST00000558217 MSH5O43196 834 aa23.43■■□□□ 1.34
SEC11A-205ENST00000558217 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
SEC11A-205ENST00000558217 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
SEC11A-205ENST00000558217 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
SEC11A-205ENST00000558217 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
SEC11A-205ENST00000558217 ARHGEF11O15085 1522 aa23.36■■□□□ 1.33
SEC11A-205ENST00000558217 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
SEC11A-205ENST00000558217 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
SEC11A-205ENST00000558217 FBLN2P98095 1184 aa23.35■■□□□ 1.33
SEC11A-205ENST00000558217 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
SEC11A-205ENST00000558217 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
SEC11A-205ENST00000558217 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
SEC11A-205ENST00000558217 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
SEC11A-205ENST00000558217 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
SEC11A-205ENST00000558217 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
SEC11A-205ENST00000558217 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
SEC11A-205ENST00000558217 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
SEC11A-205ENST00000558217 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
SEC11A-205ENST00000558217 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
SEC11A-205ENST00000558217 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
SEC11A-205ENST00000558217 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
SEC11A-205ENST00000558217 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms