RNA–Protein interactions for RNA: ENST00000558216.1

CHRNB4-203, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-203ENST00000558216 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
CHRNB4-203ENST00000558216 ABCC9O60706 1549 aa29.62■■■□□ 2.33
CHRNB4-203ENST00000558216 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
CHRNB4-203ENST00000558216 DNAJC5BQ9UF47 199 aa28.18■■■□□ 2.1
CHRNB4-203ENST00000558216 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
CHRNB4-203ENST00000558216 NACADO15069 1562 aa27.67■■■□□ 2.02
CHRNB4-203ENST00000558216 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
CHRNB4-203ENST00000558216 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
CHRNB4-203ENST00000558216 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
CHRNB4-203ENST00000558216 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
CHRNB4-203ENST00000558216 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
CHRNB4-203ENST00000558216 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
CHRNB4-203ENST00000558216 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
CHRNB4-203ENST00000558216 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
CHRNB4-203ENST00000558216 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
CHRNB4-203ENST00000558216 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
CHRNB4-203ENST00000558216 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
CHRNB4-203ENST00000558216 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
CHRNB4-203ENST00000558216 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
CHRNB4-203ENST00000558216 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
CHRNB4-203ENST00000558216 CUX2O14529 1486 aa25.68■■□□□ 1.7
CHRNB4-203ENST00000558216 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
CHRNB4-203ENST00000558216 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
CHRNB4-203ENST00000558216 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
CHRNB4-203ENST00000558216 NESP48681 1621 aa25.34■■□□□ 1.65
CHRNB4-203ENST00000558216 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
CHRNB4-203ENST00000558216 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
CHRNB4-203ENST00000558216 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
CHRNB4-203ENST00000558216 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
CHRNB4-203ENST00000558216 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
CHRNB4-203ENST00000558216 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
CHRNB4-203ENST00000558216 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
CHRNB4-203ENST00000558216 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
CHRNB4-203ENST00000558216 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
CHRNB4-203ENST00000558216 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
CHRNB4-203ENST00000558216 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
CHRNB4-203ENST00000558216 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
CHRNB4-203ENST00000558216 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
CHRNB4-203ENST00000558216 WDR62O43379 1518 aa24.72■■□□□ 1.55
CHRNB4-203ENST00000558216 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
CHRNB4-203ENST00000558216 WIZO95785 1651 aa24.61■■□□□ 1.53
CHRNB4-203ENST00000558216 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
CHRNB4-203ENST00000558216 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
CHRNB4-203ENST00000558216 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
CHRNB4-203ENST00000558216 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
CHRNB4-203ENST00000558216 CFTRP13569 1480 aa24.36■■□□□ 1.49
CHRNB4-203ENST00000558216 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
CHRNB4-203ENST00000558216 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
CHRNB4-203ENST00000558216 URB2Q14146 1524 aaKnown RBP24.34■■□□□ 1.49
CHRNB4-203ENST00000558216 RIMBP3CA6NJZ7 1639 aa24.25■■□□□ 1.47
CHRNB4-203ENST00000558216 RIMBP3BA6NNM3 1639 aa24.25■■□□□ 1.47
CHRNB4-203ENST00000558216 RIMBP3Q9UFD9 1639 aa24.25■■□□□ 1.47
CHRNB4-203ENST00000558216 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
CHRNB4-203ENST00000558216 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
CHRNB4-203ENST00000558216 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
CHRNB4-203ENST00000558216 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
CHRNB4-203ENST00000558216 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
CHRNB4-203ENST00000558216 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
CHRNB4-203ENST00000558216 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
CHRNB4-203ENST00000558216 CHD1O14646 1710 aa23.96■■□□□ 1.43
CHRNB4-203ENST00000558216 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
CHRNB4-203ENST00000558216 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
CHRNB4-203ENST00000558216 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
CHRNB4-203ENST00000558216 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
CHRNB4-203ENST00000558216 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
CHRNB4-203ENST00000558216 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
CHRNB4-203ENST00000558216 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.4
CHRNB4-203ENST00000558216 TRHP20396 242 aaPredicted RBP23.71■■□□□ 1.39
CHRNB4-203ENST00000558216 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
CHRNB4-203ENST00000558216 FBLN2P98095 1184 aa23.66■■□□□ 1.38
CHRNB4-203ENST00000558216 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
CHRNB4-203ENST00000558216 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
CHRNB4-203ENST00000558216 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
CHRNB4-203ENST00000558216 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
CHRNB4-203ENST00000558216 SOGA1O94964 1423 aa23.52■■□□□ 1.36
CHRNB4-203ENST00000558216 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
CHRNB4-203ENST00000558216 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
CHRNB4-203ENST00000558216 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
CHRNB4-203ENST00000558216 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
CHRNB4-203ENST00000558216 CUX1P39880 1505 aa23.42■■□□□ 1.34
CHRNB4-203ENST00000558216 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
CHRNB4-203ENST00000558216 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
CHRNB4-203ENST00000558216 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
CHRNB4-203ENST00000558216 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
CHRNB4-203ENST00000558216 GAPVD1Q14C86 1478 aa23.32■■□□□ 1.32
CHRNB4-203ENST00000558216 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
CHRNB4-203ENST00000558216 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
CHRNB4-203ENST00000558216 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
CHRNB4-203ENST00000558216 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
CHRNB4-203ENST00000558216 GRIN2AQ12879 1464 aa23.12■■□□□ 1.29
CHRNB4-203ENST00000558216 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
CHRNB4-203ENST00000558216 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
CHRNB4-203ENST00000558216 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
CHRNB4-203ENST00000558216 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.29
CHRNB4-203ENST00000558216 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.29
CHRNB4-203ENST00000558216 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
CHRNB4-203ENST00000558216 NUP160Q12769 1436 aa23.05■■□□□ 1.28
CHRNB4-203ENST00000558216 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
CHRNB4-203ENST00000558216 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
CHRNB4-203ENST00000558216 PRG4Q92954 1404 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms