RNA–Protein interactions for RNA: ENST00000558134.5

SEC11A-203, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3 BASIC

Gene SEC11A, Length 971 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-203ENST00000558134 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
SEC11A-203ENST00000558134 ABCC9O60706 1549 aa26.88■■□□□ 1.89
SEC11A-203ENST00000558134 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
SEC11A-203ENST00000558134 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
SEC11A-203ENST00000558134 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
SEC11A-203ENST00000558134 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
SEC11A-203ENST00000558134 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
SEC11A-203ENST00000558134 NACADO15069 1562 aa24.59■■□□□ 1.53
SEC11A-203ENST00000558134 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
SEC11A-203ENST00000558134 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
SEC11A-203ENST00000558134 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
SEC11A-203ENST00000558134 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
SEC11A-203ENST00000558134 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
SEC11A-203ENST00000558134 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
SEC11A-203ENST00000558134 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
SEC11A-203ENST00000558134 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
SEC11A-203ENST00000558134 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
SEC11A-203ENST00000558134 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
SEC11A-203ENST00000558134 CUX2O14529 1486 aa23.34■■□□□ 1.33
SEC11A-203ENST00000558134 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
SEC11A-203ENST00000558134 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
SEC11A-203ENST00000558134 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
SEC11A-203ENST00000558134 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
SEC11A-203ENST00000558134 NESP48681 1621 aa22.86■■□□□ 1.25
SEC11A-203ENST00000558134 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
SEC11A-203ENST00000558134 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
SEC11A-203ENST00000558134 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
SEC11A-203ENST00000558134 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
SEC11A-203ENST00000558134 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
SEC11A-203ENST00000558134 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
SEC11A-203ENST00000558134 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
SEC11A-203ENST00000558134 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
SEC11A-203ENST00000558134 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
SEC11A-203ENST00000558134 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
SEC11A-203ENST00000558134 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
SEC11A-203ENST00000558134 PDS5BQ9NTI5 1447 aa22.28■■□□□ 1.16
SEC11A-203ENST00000558134 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
SEC11A-203ENST00000558134 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
SEC11A-203ENST00000558134 WDR62O43379 1518 aa22.13■■□□□ 1.13
SEC11A-203ENST00000558134 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
SEC11A-203ENST00000558134 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
SEC11A-203ENST00000558134 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
SEC11A-203ENST00000558134 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
SEC11A-203ENST00000558134 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
SEC11A-203ENST00000558134 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
SEC11A-203ENST00000558134 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
SEC11A-203ENST00000558134 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
SEC11A-203ENST00000558134 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
SEC11A-203ENST00000558134 CYB5RLQ6IPT4 315 aa21.87■■□□□ 1.09
SEC11A-203ENST00000558134 FANCD2Q9BXW9 1451 aa21.84■■□□□ 1.09
SEC11A-203ENST00000558134 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
SEC11A-203ENST00000558134 WIZO95785 1651 aa21.7■■□□□ 1.06
SEC11A-203ENST00000558134 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
SEC11A-203ENST00000558134 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
SEC11A-203ENST00000558134 CFTRP13569 1480 aa21.59■■□□□ 1.05
SEC11A-203ENST00000558134 CHD1O14646 1710 aa21.49■■□□□ 1.03
SEC11A-203ENST00000558134 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
SEC11A-203ENST00000558134 FBLN2P98095 1184 aa21.47■■□□□ 1.03
SEC11A-203ENST00000558134 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
SEC11A-203ENST00000558134 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
SEC11A-203ENST00000558134 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
SEC11A-203ENST00000558134 TOPBP1Q92547 1522 aa21.33■■□□□ 1
SEC11A-203ENST00000558134 PRDM2Q13029 1718 aa21.29■■□□□ 1
SEC11A-203ENST00000558134 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SEC11A-203ENST00000558134 TARBP1Q13395 1621 aaKnown RBP21.19■□□□□ 0.98
SEC11A-203ENST00000558134 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
SEC11A-203ENST00000558134 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
SEC11A-203ENST00000558134 ILDR1Q86SU0 546 aaPredicted RBP21.12■□□□□ 0.97
SEC11A-203ENST00000558134 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
SEC11A-203ENST00000558134 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
SEC11A-203ENST00000558134 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
SEC11A-203ENST00000558134 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
SEC11A-203ENST00000558134 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
SEC11A-203ENST00000558134 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
SEC11A-203ENST00000558134 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
SEC11A-203ENST00000558134 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
SEC11A-203ENST00000558134 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
SEC11A-203ENST00000558134 SOGA1O94964 1423 aa20.95■□□□□ 0.95
SEC11A-203ENST00000558134 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
SEC11A-203ENST00000558134 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
SEC11A-203ENST00000558134 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
SEC11A-203ENST00000558134 GRIN2BQ13224 1484 aa20.82■□□□□ 0.92
SEC11A-203ENST00000558134 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
SEC11A-203ENST00000558134 KDM4FA0A1W2PPD8 638 aa20.82■□□□□ 0.92
SEC11A-203ENST00000558134 KIF13AQ9H1H9 1805 aa20.82■□□□□ 0.92
SEC11A-203ENST00000558134 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
SEC11A-203ENST00000558134 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
SEC11A-203ENST00000558134 CUX1P39880 1505 aa20.68■□□□□ 0.9
SEC11A-203ENST00000558134 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
SEC11A-203ENST00000558134 FAM69CQ0P6D2 419 aa20.66■□□□□ 0.9
SEC11A-203ENST00000558134 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
SEC11A-203ENST00000558134 KDM6BO15054 1643 aa20.56■□□□□ 0.88
SEC11A-203ENST00000558134 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
SEC11A-203ENST00000558134 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
SEC11A-203ENST00000558134 ABCC10Q5T3U5 1492 aa20.53■□□□□ 0.88
SEC11A-203ENST00000558134 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
SEC11A-203ENST00000558134 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
SEC11A-203ENST00000558134 NUP160Q12769 1436 aa20.51■□□□□ 0.87
SEC11A-203ENST00000558134 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
SEC11A-203ENST00000558134 PRG4Q92954 1404 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms