RNA–Protein interactions for RNA: ENST00000557889.1

CPNE6-205, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-205ENST00000557889 NISCHQ9Y2I1 1504 aa34.33■■■■□ 3.09
CPNE6-205ENST00000557889 CCDC180Q9P1Z9 1646 aa30.5■■■□□ 2.47
CPNE6-205ENST00000557889 ABCC9O60706 1549 aa29.82■■■□□ 2.36
CPNE6-205ENST00000557889 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
CPNE6-205ENST00000557889 NACADO15069 1562 aa28.7■■■□□ 2.18
CPNE6-205ENST00000557889 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
CPNE6-205ENST00000557889 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
CPNE6-205ENST00000557889 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
CPNE6-205ENST00000557889 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
CPNE6-205ENST00000557889 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
CPNE6-205ENST00000557889 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.06
CPNE6-205ENST00000557889 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
CPNE6-205ENST00000557889 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
CPNE6-205ENST00000557889 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
CPNE6-205ENST00000557889 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
CPNE6-205ENST00000557889 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
CPNE6-205ENST00000557889 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
CPNE6-205ENST00000557889 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
CPNE6-205ENST00000557889 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
CPNE6-205ENST00000557889 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
CPNE6-205ENST00000557889 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
CPNE6-205ENST00000557889 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
CPNE6-205ENST00000557889 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
CPNE6-205ENST00000557889 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
CPNE6-205ENST00000557889 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
CPNE6-205ENST00000557889 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
CPNE6-205ENST00000557889 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
CPNE6-205ENST00000557889 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
CPNE6-205ENST00000557889 WIZO95785 1651 aa26.14■■□□□ 1.78
CPNE6-205ENST00000557889 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
CPNE6-205ENST00000557889 NESP48681 1621 aa25.81■■□□□ 1.72
CPNE6-205ENST00000557889 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
CPNE6-205ENST00000557889 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
CPNE6-205ENST00000557889 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
CPNE6-205ENST00000557889 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
CPNE6-205ENST00000557889 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
CPNE6-205ENST00000557889 CFTRP13569 1480 aa25.57■■□□□ 1.68
CPNE6-205ENST00000557889 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
CPNE6-205ENST00000557889 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
CPNE6-205ENST00000557889 CUX2O14529 1486 aa25.47■■□□□ 1.67
CPNE6-205ENST00000557889 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
CPNE6-205ENST00000557889 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
CPNE6-205ENST00000557889 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
CPNE6-205ENST00000557889 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
CPNE6-205ENST00000557889 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
CPNE6-205ENST00000557889 WDR62O43379 1518 aa25.25■■□□□ 1.63
CPNE6-205ENST00000557889 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
CPNE6-205ENST00000557889 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
CPNE6-205ENST00000557889 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
CPNE6-205ENST00000557889 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
CPNE6-205ENST00000557889 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
CPNE6-205ENST00000557889 CUX1P39880 1505 aa24.81■■□□□ 1.56
CPNE6-205ENST00000557889 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
CPNE6-205ENST00000557889 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
CPNE6-205ENST00000557889 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
CPNE6-205ENST00000557889 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
CPNE6-205ENST00000557889 SOGA1O94964 1423 aa24.7■■□□□ 1.55
CPNE6-205ENST00000557889 DNAJC5Q9H3Z4 198 aa24.68■■□□□ 1.54
CPNE6-205ENST00000557889 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
CPNE6-205ENST00000557889 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
CPNE6-205ENST00000557889 EIF4G3O43432 1585 aaKnown RBP24.6■■□□□ 1.53
CPNE6-205ENST00000557889 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
CPNE6-205ENST00000557889 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.53
CPNE6-205ENST00000557889 BIVM-ERCC5R4GMW8 1640 aa24.58■■□□□ 1.53
CPNE6-205ENST00000557889 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
CPNE6-205ENST00000557889 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
CPNE6-205ENST00000557889 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
CPNE6-205ENST00000557889 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
CPNE6-205ENST00000557889 OSCARQ8IYS5 282 aa24.43■■□□□ 1.5
CPNE6-205ENST00000557889 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
CPNE6-205ENST00000557889 GRIN2BQ13224 1484 aa24.4■■□□□ 1.5
CPNE6-205ENST00000557889 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
CPNE6-205ENST00000557889 SNAPC4Q5SXM2 1469 aa24.36■■□□□ 1.49
CPNE6-205ENST00000557889 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
CPNE6-205ENST00000557889 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
CPNE6-205ENST00000557889 FBLN2P98095 1184 aa24.29■■□□□ 1.48
CPNE6-205ENST00000557889 CHD1O14646 1710 aa24.27■■□□□ 1.48
CPNE6-205ENST00000557889 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
CPNE6-205ENST00000557889 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
CPNE6-205ENST00000557889 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.47
CPNE6-205ENST00000557889 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
CPNE6-205ENST00000557889 ADAMTS12P58397 1594 aa24.14■■□□□ 1.45
CPNE6-205ENST00000557889 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
CPNE6-205ENST00000557889 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
CPNE6-205ENST00000557889 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
CPNE6-205ENST00000557889 IGF1RP08069 1367 aa24.06■■□□□ 1.44
CPNE6-205ENST00000557889 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
CPNE6-205ENST00000557889 NUP160Q12769 1436 aa23.99■■□□□ 1.43
CPNE6-205ENST00000557889 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
CPNE6-205ENST00000557889 RIMBP3CA6NJZ7 1639 aa23.98■■□□□ 1.43
CPNE6-205ENST00000557889 RIMBP3BA6NNM3 1639 aa23.98■■□□□ 1.43
CPNE6-205ENST00000557889 RIMBP3Q9UFD9 1639 aa23.98■■□□□ 1.43
CPNE6-205ENST00000557889 CUL7Q14999 1698 aa23.97■■□□□ 1.43
CPNE6-205ENST00000557889 CEP170Q5SW79 1584 aa23.95■■□□□ 1.42
CPNE6-205ENST00000557889 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
CPNE6-205ENST00000557889 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
CPNE6-205ENST00000557889 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
CPNE6-205ENST00000557889 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
CPNE6-205ENST00000557889 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
CPNE6-205ENST00000557889 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms