RNA–Protein interactions for RNA: ENST00000557784.1

LINC02330-201, Transcript of long intergenic non-protein coding RNA 2330, humanhuman

TSL 4 BASIC

Gene LINC02330, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02330-201ENST00000557784 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
LINC02330-201ENST00000557784 ABCC9O60706 1549 aa20.15■□□□□ 0.82
LINC02330-201ENST00000557784 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
LINC02330-201ENST00000557784 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
LINC02330-201ENST00000557784 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
LINC02330-201ENST00000557784 NACADO15069 1562 aa18.64■□□□□ 0.58
LINC02330-201ENST00000557784 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
LINC02330-201ENST00000557784 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC02330-201ENST00000557784 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
LINC02330-201ENST00000557784 BICRAQ9NZM4 1560 aa18.45■□□□□ 0.54
LINC02330-201ENST00000557784 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
LINC02330-201ENST00000557784 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
LINC02330-201ENST00000557784 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
LINC02330-201ENST00000557784 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
LINC02330-201ENST00000557784 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
LINC02330-201ENST00000557784 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
LINC02330-201ENST00000557784 CUX2O14529 1486 aa17.8■□□□□ 0.44
LINC02330-201ENST00000557784 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
LINC02330-201ENST00000557784 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
LINC02330-201ENST00000557784 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
LINC02330-201ENST00000557784 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
LINC02330-201ENST00000557784 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.36
LINC02330-201ENST00000557784 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
LINC02330-201ENST00000557784 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
LINC02330-201ENST00000557784 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
LINC02330-201ENST00000557784 NESP48681 1621 aa17.11■□□□□ 0.33
LINC02330-201ENST00000557784 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
LINC02330-201ENST00000557784 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
LINC02330-201ENST00000557784 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
LINC02330-201ENST00000557784 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
LINC02330-201ENST00000557784 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
LINC02330-201ENST00000557784 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
LINC02330-201ENST00000557784 SMARCA4P51532 1647 aa16.82■□□□□ 0.28
LINC02330-201ENST00000557784 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
LINC02330-201ENST00000557784 WDR62O43379 1518 aa16.79■□□□□ 0.28
LINC02330-201ENST00000557784 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
LINC02330-201ENST00000557784 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
LINC02330-201ENST00000557784 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
LINC02330-201ENST00000557784 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
LINC02330-201ENST00000557784 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
LINC02330-201ENST00000557784 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
LINC02330-201ENST00000557784 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
LINC02330-201ENST00000557784 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
LINC02330-201ENST00000557784 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
LINC02330-201ENST00000557784 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
LINC02330-201ENST00000557784 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
LINC02330-201ENST00000557784 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
LINC02330-201ENST00000557784 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
LINC02330-201ENST00000557784 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
LINC02330-201ENST00000557784 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
LINC02330-201ENST00000557784 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
LINC02330-201ENST00000557784 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
LINC02330-201ENST00000557784 CFTRP13569 1480 aa16.29■□□□□ 0.2
LINC02330-201ENST00000557784 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
LINC02330-201ENST00000557784 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
LINC02330-201ENST00000557784 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
LINC02330-201ENST00000557784 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
LINC02330-201ENST00000557784 CHD1O14646 1710 aa16.17■□□□□ 0.18
LINC02330-201ENST00000557784 WIZO95785 1651 aa16.17■□□□□ 0.18
LINC02330-201ENST00000557784 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
LINC02330-201ENST00000557784 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
LINC02330-201ENST00000557784 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
LINC02330-201ENST00000557784 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
LINC02330-201ENST00000557784 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.14
LINC02330-201ENST00000557784 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
LINC02330-201ENST00000557784 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
LINC02330-201ENST00000557784 ILDR1Q86SU0 546 aaPredicted RBP15.94■□□□□ 0.14
LINC02330-201ENST00000557784 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
LINC02330-201ENST00000557784 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
LINC02330-201ENST00000557784 FBLN2P98095 1184 aa15.87■□□□□ 0.13
LINC02330-201ENST00000557784 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
LINC02330-201ENST00000557784 WDR97A6NE52 1622 aa15.83■□□□□ 0.13
LINC02330-201ENST00000557784 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
LINC02330-201ENST00000557784 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
LINC02330-201ENST00000557784 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
LINC02330-201ENST00000557784 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
LINC02330-201ENST00000557784 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
LINC02330-201ENST00000557784 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
LINC02330-201ENST00000557784 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.11
LINC02330-201ENST00000557784 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
LINC02330-201ENST00000557784 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
LINC02330-201ENST00000557784 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
LINC02330-201ENST00000557784 SOGA1O94964 1423 aa15.67■□□□□ 0.1
LINC02330-201ENST00000557784 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
LINC02330-201ENST00000557784 ERCC6L2Q5T890 1561 aa15.65■□□□□ 0.1
LINC02330-201ENST00000557784 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
LINC02330-201ENST00000557784 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
LINC02330-201ENST00000557784 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
LINC02330-201ENST00000557784 SHROOM2Q13796 1616 aa15.56■□□□□ 0.08
LINC02330-201ENST00000557784 ABCC10Q5T3U5 1492 aa15.53■□□□□ 0.08
LINC02330-201ENST00000557784 KDM6BO15054 1643 aa15.53■□□□□ 0.08
LINC02330-201ENST00000557784 DIP2BQ9P265 1576 aa15.5■□□□□ 0.07
LINC02330-201ENST00000557784 NUP160Q12769 1436 aa15.5■□□□□ 0.07
LINC02330-201ENST00000557784 MAPKBP1O60336 1514 aa15.49■□□□□ 0.07
LINC02330-201ENST00000557784 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
LINC02330-201ENST00000557784 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
LINC02330-201ENST00000557784 CUX1P39880 1505 aa15.48■□□□□ 0.07
LINC02330-201ENST00000557784 HECW2Q9P2P5 1572 aa15.46■□□□□ 0.07
LINC02330-201ENST00000557784 FAM69CQ0P6D2 419 aa15.42■□□□□ 0.06
LINC02330-201ENST00000557784 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms