RNA–Protein interactions for RNA: ENST00000557735.1

ATL1-210, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-210ENST00000557735 NISCHQ9Y2I1 1504 aa42.26■■■■■ 4.36
ATL1-210ENST00000557735 CCDC180Q9P1Z9 1646 aa37.57■■■■□ 3.6
ATL1-210ENST00000557735 ABCC9O60706 1549 aa36.57■■■■□ 3.44
ATL1-210ENST00000557735 NACADO15069 1562 aa35.27■■■■□ 3.24
ATL1-210ENST00000557735 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
ATL1-210ENST00000557735 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
ATL1-210ENST00000557735 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
ATL1-210ENST00000557735 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
ATL1-210ENST00000557735 DCAF1Q9Y4B6 1507 aa35.02■■■■□ 3.2
ATL1-210ENST00000557735 UNC13AQ9UPW8 1703 aa34.56■■■■□ 3.12
ATL1-210ENST00000557735 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
ATL1-210ENST00000557735 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
ATL1-210ENST00000557735 PABPN1Q86U42 306 aaKnown RBP eCLIP34.15■■■■□ 3.06
ATL1-210ENST00000557735 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
ATL1-210ENST00000557735 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
ATL1-210ENST00000557735 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
ATL1-210ENST00000557735 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
ATL1-210ENST00000557735 CECR2Q9BXF3 1484 aa32.91■■■□□ 2.86
ATL1-210ENST00000557735 SMARCA4P51532 1647 aa32.77■■■□□ 2.84
ATL1-210ENST00000557735 BAZ1AQ9NRL2 1556 aaPredicted RBP32.72■■■□□ 2.83
ATL1-210ENST00000557735 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.8
ATL1-210ENST00000557735 MROH2BQ7Z745 1585 aa32.57■■■□□ 2.8
ATL1-210ENST00000557735 NCAPD3P42695 1498 aa32.55■■■□□ 2.8
ATL1-210ENST00000557735 SMARCA2P51531 1590 aa32.51■■■□□ 2.79
ATL1-210ENST00000557735 PEG3Q9GZU2 1588 aa32.51■■■□□ 2.79
ATL1-210ENST00000557735 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
ATL1-210ENST00000557735 BAZ1BQ9UIG0 1483 aaKnown RBP32.25■■■□□ 2.75
ATL1-210ENST00000557735 WIZO95785 1651 aa32.22■■■□□ 2.75
ATL1-210ENST00000557735 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
ATL1-210ENST00000557735 TOP2AP11388 1531 aaKnown RBP31.88■■■□□ 2.69
ATL1-210ENST00000557735 NESP48681 1621 aa31.71■■■□□ 2.67
ATL1-210ENST00000557735 LAMC3Q9Y6N6 1575 aa31.67■■■□□ 2.66
ATL1-210ENST00000557735 CADPSQ9ULU8 1353 aa31.57■■■□□ 2.64
ATL1-210ENST00000557735 CCDC88BA6NC98 1476 aa31.49■■■□□ 2.63
ATL1-210ENST00000557735 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
ATL1-210ENST00000557735 CFTRP13569 1480 aa31.43■■■□□ 2.62
ATL1-210ENST00000557735 PDS5BQ9NTI5 1447 aa31.39■■■□□ 2.62
ATL1-210ENST00000557735 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
ATL1-210ENST00000557735 SUPT5HO00267 1087 aaKnown RBP31.29■■■□□ 2.6
ATL1-210ENST00000557735 THOC2Q8NI27 1593 aaKnown RBP31.27■■■□□ 2.6
ATL1-210ENST00000557735 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
ATL1-210ENST00000557735 CUX2O14529 1486 aa31.2■■■□□ 2.58
ATL1-210ENST00000557735 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
ATL1-210ENST00000557735 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
ATL1-210ENST00000557735 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
ATL1-210ENST00000557735 WDR62O43379 1518 aa31.03■■■□□ 2.56
ATL1-210ENST00000557735 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
ATL1-210ENST00000557735 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
ATL1-210ENST00000557735 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
ATL1-210ENST00000557735 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
ATL1-210ENST00000557735 CUX1P39880 1505 aa30.54■■■□□ 2.48
ATL1-210ENST00000557735 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
ATL1-210ENST00000557735 POLA1P09884 1462 aaPredicted RBP30.48■■■□□ 2.47
ATL1-210ENST00000557735 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
ATL1-210ENST00000557735 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
ATL1-210ENST00000557735 ZNF608Q9ULD9 1512 aaPredicted RBP30.37■■■□□ 2.45
ATL1-210ENST00000557735 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
ATL1-210ENST00000557735 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
ATL1-210ENST00000557735 WRNQ14191 1432 aaPredicted RBP eCLIP30.32■■■□□ 2.44
ATL1-210ENST00000557735 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
ATL1-210ENST00000557735 SOGA1O94964 1423 aa30.3■■■□□ 2.44
ATL1-210ENST00000557735 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
ATL1-210ENST00000557735 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
ATL1-210ENST00000557735 WDR97A6NE52 1622 aa30.23■■■□□ 2.43
ATL1-210ENST00000557735 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
ATL1-210ENST00000557735 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.42
ATL1-210ENST00000557735 DNAJC5Q9H3Z4 198 aa30.12■■■□□ 2.41
ATL1-210ENST00000557735 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
ATL1-210ENST00000557735 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
ATL1-210ENST00000557735 GAPVD1Q14C86 1478 aa29.97■■■□□ 2.39
ATL1-210ENST00000557735 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
ATL1-210ENST00000557735 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
ATL1-210ENST00000557735 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
ATL1-210ENST00000557735 MAGI1Q96QZ7 1491 aaPredicted RBP29.89■■■□□ 2.38
ATL1-210ENST00000557735 CHD1O14646 1710 aa29.87■■■□□ 2.37
ATL1-210ENST00000557735 OSCARQ8IYS5 282 aa29.84■■■□□ 2.37
ATL1-210ENST00000557735 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
ATL1-210ENST00000557735 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
ATL1-210ENST00000557735 ADAMTS12P58397 1594 aa29.72■■■□□ 2.35
ATL1-210ENST00000557735 FBLN2P98095 1184 aa29.67■■■□□ 2.34
ATL1-210ENST00000557735 KIF27Q86VH2 1401 aa29.67■■■□□ 2.34
ATL1-210ENST00000557735 CHMP7Q8WUX9 453 aaPredicted RBP29.65■■■□□ 2.34
ATL1-210ENST00000557735 FHAD1B1AJZ9 1412 aa29.63■■■□□ 2.33
ATL1-210ENST00000557735 IGF1RP08069 1367 aa29.59■■■□□ 2.33
ATL1-210ENST00000557735 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
ATL1-210ENST00000557735 CLASP1Q7Z460 1538 aa29.58■■■□□ 2.33
ATL1-210ENST00000557735 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
ATL1-210ENST00000557735 CUL7Q14999 1698 aa29.51■■■□□ 2.31
ATL1-210ENST00000557735 NUP160Q12769 1436 aa29.49■■■□□ 2.31
ATL1-210ENST00000557735 RUSC2Q8N2Y8 1516 aa29.49■■■□□ 2.31
ATL1-210ENST00000557735 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
ATL1-210ENST00000557735 RIMBP3CA6NJZ7 1639 aa29.44■■■□□ 2.3
ATL1-210ENST00000557735 RIMBP3BA6NNM3 1639 aa29.44■■■□□ 2.3
ATL1-210ENST00000557735 RIMBP3Q9UFD9 1639 aa29.44■■■□□ 2.3
ATL1-210ENST00000557735 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
ATL1-210ENST00000557735 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
ATL1-210ENST00000557735 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
ATL1-210ENST00000557735 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
ATL1-210ENST00000557735 RAPGEF2Q9Y4G8 1499 aa29.23■■■□□ 2.27
ATL1-210ENST00000557735 ARAP1Q96P48 1450 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms