RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
PABPN1-208ENST00000557702 ABCC9O60706 1549 aa22.96■■□□□ 1.27
PABPN1-208ENST00000557702 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
PABPN1-208ENST00000557702 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
PABPN1-208ENST00000557702 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
PABPN1-208ENST00000557702 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
PABPN1-208ENST00000557702 NACADO15069 1562 aa21.18■□□□□ 0.98
PABPN1-208ENST00000557702 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
PABPN1-208ENST00000557702 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
PABPN1-208ENST00000557702 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
PABPN1-208ENST00000557702 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
PABPN1-208ENST00000557702 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
PABPN1-208ENST00000557702 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
PABPN1-208ENST00000557702 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
PABPN1-208ENST00000557702 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
PABPN1-208ENST00000557702 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
PABPN1-208ENST00000557702 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
PABPN1-208ENST00000557702 CUX2O14529 1486 aa20.11■□□□□ 0.81
PABPN1-208ENST00000557702 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
PABPN1-208ENST00000557702 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
PABPN1-208ENST00000557702 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
PABPN1-208ENST00000557702 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
PABPN1-208ENST00000557702 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
PABPN1-208ENST00000557702 NESP48681 1621 aa19.49■□□□□ 0.71
PABPN1-208ENST00000557702 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
PABPN1-208ENST00000557702 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
PABPN1-208ENST00000557702 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
PABPN1-208ENST00000557702 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
PABPN1-208ENST00000557702 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
PABPN1-208ENST00000557702 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
PABPN1-208ENST00000557702 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
PABPN1-208ENST00000557702 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
PABPN1-208ENST00000557702 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
PABPN1-208ENST00000557702 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.65
PABPN1-208ENST00000557702 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
PABPN1-208ENST00000557702 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
PABPN1-208ENST00000557702 WDR62O43379 1518 aa19■□□□□ 0.63
PABPN1-208ENST00000557702 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
PABPN1-208ENST00000557702 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
PABPN1-208ENST00000557702 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
PABPN1-208ENST00000557702 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
PABPN1-208ENST00000557702 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
PABPN1-208ENST00000557702 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
PABPN1-208ENST00000557702 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
PABPN1-208ENST00000557702 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
PABPN1-208ENST00000557702 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
PABPN1-208ENST00000557702 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
PABPN1-208ENST00000557702 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
PABPN1-208ENST00000557702 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
PABPN1-208ENST00000557702 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
PABPN1-208ENST00000557702 CFTRP13569 1480 aa18.58■□□□□ 0.56
PABPN1-208ENST00000557702 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
PABPN1-208ENST00000557702 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
PABPN1-208ENST00000557702 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
PABPN1-208ENST00000557702 WIZO95785 1651 aa18.48■□□□□ 0.55
PABPN1-208ENST00000557702 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
PABPN1-208ENST00000557702 FBLN2P98095 1184 aa18.39■□□□□ 0.53
PABPN1-208ENST00000557702 EIF4G3O43432 1585 aaKnown RBP18.31■□□□□ 0.52
PABPN1-208ENST00000557702 CHD1O14646 1710 aa18.3■□□□□ 0.52
PABPN1-208ENST00000557702 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.527e-8■■■■□ 24.9
PABPN1-208ENST00000557702 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
PABPN1-208ENST00000557702 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
PABPN1-208ENST00000557702 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
PABPN1-208ENST00000557702 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
PABPN1-208ENST00000557702 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
PABPN1-208ENST00000557702 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
PABPN1-208ENST00000557702 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
PABPN1-208ENST00000557702 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
PABPN1-208ENST00000557702 ILDR1Q86SU0 546 aaPredicted RBP18.09■□□□□ 0.49
PABPN1-208ENST00000557702 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
PABPN1-208ENST00000557702 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
PABPN1-208ENST00000557702 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
PABPN1-208ENST00000557702 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
PABPN1-208ENST00000557702 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
PABPN1-208ENST00000557702 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
PABPN1-208ENST00000557702 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
PABPN1-208ENST00000557702 SOGA1O94964 1423 aa18■□□□□ 0.47
PABPN1-208ENST00000557702 MAGI1Q96QZ7 1491 aaPredicted RBP17.98■□□□□ 0.47
PABPN1-208ENST00000557702 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
PABPN1-208ENST00000557702 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
PABPN1-208ENST00000557702 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
PABPN1-208ENST00000557702 KDM4FA0A1W2PPD8 638 aa17.84■□□□□ 0.45
PABPN1-208ENST00000557702 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
PABPN1-208ENST00000557702 ERCC6L2Q5T890 1561 aa17.78■□□□□ 0.44
PABPN1-208ENST00000557702 FAM69CQ0P6D2 419 aa17.75■□□□□ 0.43
PABPN1-208ENST00000557702 KIF13AQ9H1H9 1805 aa17.75■□□□□ 0.43
PABPN1-208ENST00000557702 CEP170Q5SW79 1584 aa17.69■□□□□ 0.42
PABPN1-208ENST00000557702 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
PABPN1-208ENST00000557702 CUX1P39880 1505 aa17.67■□□□□ 0.42
PABPN1-208ENST00000557702 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
PABPN1-208ENST00000557702 ABCC10Q5T3U5 1492 aa17.65■□□□□ 0.42
PABPN1-208ENST00000557702 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
PABPN1-208ENST00000557702 NUP160Q12769 1436 aa17.64■□□□□ 0.41
PABPN1-208ENST00000557702 KDM6BO15054 1643 aa17.6■□□□□ 0.41
PABPN1-208ENST00000557702 SHROOM2Q13796 1616 aa17.58■□□□□ 0.41
PABPN1-208ENST00000557702 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
PABPN1-208ENST00000557702 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
PABPN1-208ENST00000557702 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
PABPN1-208ENST00000557702 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
PABPN1-208ENST00000557702 MAPKBP1O60336 1514 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms