RNA–Protein interactions for RNA: ENST00000557512.5

CGRRF1-208, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 901 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-208ENST00000557512 NISCHQ9Y2I1 1504 aa34.79■■■■□ 3.16
CGRRF1-208ENST00000557512 ABCC9O60706 1549 aa32.84■■■□□ 2.85
CGRRF1-208ENST00000557512 DNAJC5BQ9UF47 199 aa31.94■■■□□ 2.7
CGRRF1-208ENST00000557512 CCDC180Q9P1Z9 1646 aa31.58■■■□□ 2.65
CGRRF1-208ENST00000557512 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
CGRRF1-208ENST00000557512 PABPN1Q86U42 306 aaKnown RBP eCLIP30.47■■■□□ 2.47
CGRRF1-208ENST00000557512 NACADO15069 1562 aa30.2■■■□□ 2.43
CGRRF1-208ENST00000557512 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
CGRRF1-208ENST00000557512 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
CGRRF1-208ENST00000557512 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
CGRRF1-208ENST00000557512 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
CGRRF1-208ENST00000557512 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
CGRRF1-208ENST00000557512 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
CGRRF1-208ENST00000557512 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
CGRRF1-208ENST00000557512 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
CGRRF1-208ENST00000557512 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
CGRRF1-208ENST00000557512 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
CGRRF1-208ENST00000557512 CUX2O14529 1486 aa28.73■■■□□ 2.19
CGRRF1-208ENST00000557512 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.17
CGRRF1-208ENST00000557512 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
CGRRF1-208ENST00000557512 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
CGRRF1-208ENST00000557512 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
CGRRF1-208ENST00000557512 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
CGRRF1-208ENST00000557512 NESP48681 1621 aa27.9■■■□□ 2.06
CGRRF1-208ENST00000557512 THOC2Q8NI27 1593 aaKnown RBP27.77■■■□□ 2.04
CGRRF1-208ENST00000557512 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
CGRRF1-208ENST00000557512 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
CGRRF1-208ENST00000557512 SMARCA2P51531 1590 aa27.53■■■□□ 2
CGRRF1-208ENST00000557512 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
CGRRF1-208ENST00000557512 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
CGRRF1-208ENST00000557512 KIF21AQ7Z4S6 1674 aa27.37■■□□□ 1.97
CGRRF1-208ENST00000557512 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
CGRRF1-208ENST00000557512 SMARCA4P51532 1647 aa27.33■■□□□ 1.97
CGRRF1-208ENST00000557512 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
CGRRF1-208ENST00000557512 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
CGRRF1-208ENST00000557512 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
CGRRF1-208ENST00000557512 WDR62O43379 1518 aa27.15■■□□□ 1.94
CGRRF1-208ENST00000557512 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
CGRRF1-208ENST00000557512 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
CGRRF1-208ENST00000557512 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
CGRRF1-208ENST00000557512 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
CGRRF1-208ENST00000557512 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
CGRRF1-208ENST00000557512 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
CGRRF1-208ENST00000557512 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.89
CGRRF1-208ENST00000557512 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
CGRRF1-208ENST00000557512 MROH2BQ7Z745 1585 aa26.81■■□□□ 1.88
CGRRF1-208ENST00000557512 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
CGRRF1-208ENST00000557512 CYB5RLQ6IPT4 315 aa26.76■■□□□ 1.87
CGRRF1-208ENST00000557512 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
CGRRF1-208ENST00000557512 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
CGRRF1-208ENST00000557512 CFTRP13569 1480 aa26.51■■□□□ 1.83
CGRRF1-208ENST00000557512 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
CGRRF1-208ENST00000557512 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
CGRRF1-208ENST00000557512 WIZO95785 1651 aa26.38■■□□□ 1.81
CGRRF1-208ENST00000557512 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
CGRRF1-208ENST00000557512 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
CGRRF1-208ENST00000557512 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
CGRRF1-208ENST00000557512 FBLN2P98095 1184 aa26.16■■□□□ 1.78
CGRRF1-208ENST00000557512 CHD1O14646 1710 aa26.15■■□□□ 1.78
CGRRF1-208ENST00000557512 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
CGRRF1-208ENST00000557512 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
CGRRF1-208ENST00000557512 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
CGRRF1-208ENST00000557512 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
CGRRF1-208ENST00000557512 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
CGRRF1-208ENST00000557512 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
CGRRF1-208ENST00000557512 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
CGRRF1-208ENST00000557512 ILDR1Q86SU0 546 aaPredicted RBP25.91■■□□□ 1.74
CGRRF1-208ENST00000557512 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
CGRRF1-208ENST00000557512 CHMP7Q8WUX9 453 aaPredicted RBP25.78■■□□□ 1.72
CGRRF1-208ENST00000557512 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
CGRRF1-208ENST00000557512 POLA1P09884 1462 aaPredicted RBP25.78■■□□□ 1.72
CGRRF1-208ENST00000557512 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
CGRRF1-208ENST00000557512 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
CGRRF1-208ENST00000557512 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
CGRRF1-208ENST00000557512 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
CGRRF1-208ENST00000557512 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
CGRRF1-208ENST00000557512 SOGA1O94964 1423 aa25.66■■□□□ 1.7
CGRRF1-208ENST00000557512 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
CGRRF1-208ENST00000557512 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
CGRRF1-208ENST00000557512 KDM4FA0A1W2PPD8 638 aa25.54■■□□□ 1.68
CGRRF1-208ENST00000557512 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
CGRRF1-208ENST00000557512 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
CGRRF1-208ENST00000557512 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
CGRRF1-208ENST00000557512 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
CGRRF1-208ENST00000557512 KIF13AQ9H1H9 1805 aa25.38■■□□□ 1.65
CGRRF1-208ENST00000557512 FAM69CQ0P6D2 419 aa25.29■■□□□ 1.64
CGRRF1-208ENST00000557512 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
CGRRF1-208ENST00000557512 CUX1P39880 1505 aa25.25■■□□□ 1.63
CGRRF1-208ENST00000557512 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
CGRRF1-208ENST00000557512 ABCC10Q5T3U5 1492 aa25.21■■□□□ 1.63
CGRRF1-208ENST00000557512 GRIN2AQ12879 1464 aa25.2■■□□□ 1.62
CGRRF1-208ENST00000557512 NUP160Q12769 1436 aa25.19■■□□□ 1.62
CGRRF1-208ENST00000557512 SHROOM2Q13796 1616 aa25.13■■□□□ 1.61
CGRRF1-208ENST00000557512 KDM6BO15054 1643 aa25.12■■□□□ 1.61
CGRRF1-208ENST00000557512 ABCA5Q8WWZ7 1642 aa25.1■■□□□ 1.61
CGRRF1-208ENST00000557512 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
CGRRF1-208ENST00000557512 DIP2BQ9P265 1576 aa25.06■■□□□ 1.6
CGRRF1-208ENST00000557512 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
CGRRF1-208ENST00000557512 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
CGRRF1-208ENST00000557512 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms