RNA–Protein interactions for RNA: ENST00000557459.1

NFKBIA-210, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2

Gene NFKBIA, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-210ENST00000557459 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
NFKBIA-210ENST00000557459 ABCC9O60706 1549 aa34.47■■■■□ 3.11
NFKBIA-210ENST00000557459 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
NFKBIA-210ENST00000557459 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
NFKBIA-210ENST00000557459 RB1CC1Q8TDY2 1594 aa32.55■■■□□ 2.8
NFKBIA-210ENST00000557459 NACADO15069 1562 aa32.22■■■□□ 2.75
NFKBIA-210ENST00000557459 DCAF8L2P0C7V8 631 aa32.18■■■□□ 2.74
NFKBIA-210ENST00000557459 PABPN1Q86U42 306 aaKnown RBP eCLIP32.1■■■□□ 2.73
NFKBIA-210ENST00000557459 UNC13AQ9UPW8 1703 aa31.71■■■□□ 2.67
NFKBIA-210ENST00000557459 MYO15BQ96JP2 1530 aa31.61■■■□□ 2.65
NFKBIA-210ENST00000557459 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
NFKBIA-210ENST00000557459 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
NFKBIA-210ENST00000557459 DCAF1Q9Y4B6 1507 aa31.36■■■□□ 2.61
NFKBIA-210ENST00000557459 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
NFKBIA-210ENST00000557459 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
NFKBIA-210ENST00000557459 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
NFKBIA-210ENST00000557459 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
NFKBIA-210ENST00000557459 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
NFKBIA-210ENST00000557459 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
NFKBIA-210ENST00000557459 CUX2O14529 1486 aa29.8■■■□□ 2.36
NFKBIA-210ENST00000557459 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
NFKBIA-210ENST00000557459 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
NFKBIA-210ENST00000557459 ATAD2BQ9ULI0 1458 aa29.66■■■□□ 2.34
NFKBIA-210ENST00000557459 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
NFKBIA-210ENST00000557459 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
NFKBIA-210ENST00000557459 NESP48681 1621 aa29.49■■■□□ 2.31
NFKBIA-210ENST00000557459 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
NFKBIA-210ENST00000557459 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
NFKBIA-210ENST00000557459 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
NFKBIA-210ENST00000557459 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
NFKBIA-210ENST00000557459 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
NFKBIA-210ENST00000557459 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
NFKBIA-210ENST00000557459 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
NFKBIA-210ENST00000557459 RSF1Q96T23 1441 aaPredicted RBP29.05■■■□□ 2.24
NFKBIA-210ENST00000557459 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
NFKBIA-210ENST00000557459 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
NFKBIA-210ENST00000557459 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
NFKBIA-210ENST00000557459 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.22
NFKBIA-210ENST00000557459 WIZO95785 1651 aa28.85■■■□□ 2.21
NFKBIA-210ENST00000557459 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
NFKBIA-210ENST00000557459 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
NFKBIA-210ENST00000557459 WDR62O43379 1518 aa28.71■■■□□ 2.19
NFKBIA-210ENST00000557459 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
NFKBIA-210ENST00000557459 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
NFKBIA-210ENST00000557459 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
NFKBIA-210ENST00000557459 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
NFKBIA-210ENST00000557459 CFTRP13569 1480 aa28.46■■■□□ 2.15
NFKBIA-210ENST00000557459 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
NFKBIA-210ENST00000557459 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
NFKBIA-210ENST00000557459 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
NFKBIA-210ENST00000557459 IFT140Q96RY7 1462 aa28.06■■■□□ 2.08
NFKBIA-210ENST00000557459 RIMBP3CA6NJZ7 1639 aa28.04■■■□□ 2.08
NFKBIA-210ENST00000557459 RIMBP3BA6NNM3 1639 aa28.04■■■□□ 2.08
NFKBIA-210ENST00000557459 RIMBP3Q9UFD9 1639 aa28.04■■■□□ 2.08
NFKBIA-210ENST00000557459 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
NFKBIA-210ENST00000557459 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
NFKBIA-210ENST00000557459 ARHGEF11O15085 1522 aa27.95■■■□□ 2.06
NFKBIA-210ENST00000557459 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
NFKBIA-210ENST00000557459 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
NFKBIA-210ENST00000557459 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
NFKBIA-210ENST00000557459 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.041e-9■■■■□ 23.4
NFKBIA-210ENST00000557459 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
NFKBIA-210ENST00000557459 FBLN2P98095 1184 aa27.77■■■□□ 2.04
NFKBIA-210ENST00000557459 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
NFKBIA-210ENST00000557459 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.02
NFKBIA-210ENST00000557459 CHD1O14646 1710 aa27.67■■■□□ 2.02
NFKBIA-210ENST00000557459 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
NFKBIA-210ENST00000557459 ARAP1Q96P48 1450 aa27.65■■■□□ 2.02
NFKBIA-210ENST00000557459 RAD54L2Q9Y4B4 1467 aa27.6■■■□□ 2.01
NFKBIA-210ENST00000557459 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
NFKBIA-210ENST00000557459 SOGA1O94964 1423 aa27.56■■■□□ 2
NFKBIA-210ENST00000557459 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
NFKBIA-210ENST00000557459 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
NFKBIA-210ENST00000557459 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
NFKBIA-210ENST00000557459 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
NFKBIA-210ENST00000557459 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
NFKBIA-210ENST00000557459 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
NFKBIA-210ENST00000557459 CUX1P39880 1505 aa27.35■■□□□ 1.97
NFKBIA-210ENST00000557459 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
NFKBIA-210ENST00000557459 GRIN2BQ13224 1484 aa27.34■■□□□ 1.97
NFKBIA-210ENST00000557459 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
NFKBIA-210ENST00000557459 SYNJ2O15056 1496 aa27.29■■□□□ 1.96
NFKBIA-210ENST00000557459 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
NFKBIA-210ENST00000557459 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
NFKBIA-210ENST00000557459 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
NFKBIA-210ENST00000557459 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
NFKBIA-210ENST00000557459 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
NFKBIA-210ENST00000557459 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
NFKBIA-210ENST00000557459 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
NFKBIA-210ENST00000557459 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
NFKBIA-210ENST00000557459 GRIN2AQ12879 1464 aa26.98■■□□□ 1.91
NFKBIA-210ENST00000557459 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
NFKBIA-210ENST00000557459 NUP160Q12769 1436 aa26.9■■□□□ 1.9
NFKBIA-210ENST00000557459 CEP170Q5SW79 1584 aa26.88■■□□□ 1.89
NFKBIA-210ENST00000557459 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
NFKBIA-210ENST00000557459 FHAD1B1AJZ9 1412 aa26.83■■□□□ 1.89
NFKBIA-210ENST00000557459 KIF27Q86VH2 1401 aa26.81■■□□□ 1.88
NFKBIA-210ENST00000557459 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
NFKBIA-210ENST00000557459 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
NFKBIA-210ENST00000557459 ERICH3Q5RHP9 1530 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms