RNA–Protein interactions for RNA: ENST00000557441.5

CCNK-209, Transcript of cyclin K, humanhuman

TSL 5

Gene CCNK, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-209ENST00000557441 NISCHQ9Y2I1 1504 aa31.95■■■□□ 2.71
CCNK-209ENST00000557441 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
CCNK-209ENST00000557441 ABCC9O60706 1549 aa28.52■■■□□ 2.16
CCNK-209ENST00000557441 CCDC180Q9P1Z9 1646 aa28.44■■■□□ 2.14
CCNK-209ENST00000557441 CHIC1Q5VXU3 224 aa27.91■■■□□ 2.06
CCNK-209ENST00000557441 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CCNK-209ENST00000557441 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
CCNK-209ENST00000557441 NACADO15069 1562 aa26.97■■□□□ 1.91
CCNK-209ENST00000557441 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
CCNK-209ENST00000557441 DNAJC5BQ9UF47 199 aa26.63■■□□□ 1.85
CCNK-209ENST00000557441 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
CCNK-209ENST00000557441 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
CCNK-209ENST00000557441 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
CCNK-209ENST00000557441 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
CCNK-209ENST00000557441 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
CCNK-209ENST00000557441 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
CCNK-209ENST00000557441 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
CCNK-209ENST00000557441 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
CCNK-209ENST00000557441 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
CCNK-209ENST00000557441 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
CCNK-209ENST00000557441 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
CCNK-209ENST00000557441 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
CCNK-209ENST00000557441 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
CCNK-209ENST00000557441 SMARCA4P51532 1647 aa24.83■■□□□ 1.56
CCNK-209ENST00000557441 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
CCNK-209ENST00000557441 BAZ1AQ9NRL2 1556 aaPredicted RBP24.79■■□□□ 1.56
CCNK-209ENST00000557441 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.54
CCNK-209ENST00000557441 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
CCNK-209ENST00000557441 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
CCNK-209ENST00000557441 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
CCNK-209ENST00000557441 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
CCNK-209ENST00000557441 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
CCNK-209ENST00000557441 NESP48681 1621 aa24.5■■□□□ 1.51
CCNK-209ENST00000557441 CUX2O14529 1486 aa24.45■■□□□ 1.5
CCNK-209ENST00000557441 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
CCNK-209ENST00000557441 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
CCNK-209ENST00000557441 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
CCNK-209ENST00000557441 WIZO95785 1651 aa24.29■■□□□ 1.48
CCNK-209ENST00000557441 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
CCNK-209ENST00000557441 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
CCNK-209ENST00000557441 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
CCNK-209ENST00000557441 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
CCNK-209ENST00000557441 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
CCNK-209ENST00000557441 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
CCNK-209ENST00000557441 CFTRP13569 1480 aa23.95■■□□□ 1.42
CCNK-209ENST00000557441 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
CCNK-209ENST00000557441 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
CCNK-209ENST00000557441 WDR62O43379 1518 aa23.85■■□□□ 1.41
CCNK-209ENST00000557441 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
CCNK-209ENST00000557441 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
CCNK-209ENST00000557441 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
CCNK-209ENST00000557441 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
CCNK-209ENST00000557441 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
CCNK-209ENST00000557441 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
CCNK-209ENST00000557441 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
CCNK-209ENST00000557441 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
CCNK-209ENST00000557441 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
CCNK-209ENST00000557441 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
CCNK-209ENST00000557441 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
CCNK-209ENST00000557441 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.323e-6■■■■□ 24.7
CCNK-209ENST00000557441 FBLN2P98095 1184 aa23.27■■□□□ 1.32
CCNK-209ENST00000557441 SOGA1O94964 1423 aa23.25■■□□□ 1.31
CCNK-209ENST00000557441 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
CCNK-209ENST00000557441 RAD54L2Q9Y4B4 1467 aa23.22■■□□□ 1.31
CCNK-209ENST00000557441 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
CCNK-209ENST00000557441 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
CCNK-209ENST00000557441 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
CCNK-209ENST00000557441 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
CCNK-209ENST00000557441 FOXD1Q16676 465 aa23.12■■□□□ 1.29
CCNK-209ENST00000557441 CUX1P39880 1505 aa23.12■■□□□ 1.29
CCNK-209ENST00000557441 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
CCNK-209ENST00000557441 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
CCNK-209ENST00000557441 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
CCNK-209ENST00000557441 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
CCNK-209ENST00000557441 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
CCNK-209ENST00000557441 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
CCNK-209ENST00000557441 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
CCNK-209ENST00000557441 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
CCNK-209ENST00000557441 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
CCNK-209ENST00000557441 CHD1O14646 1710 aa22.93■■□□□ 1.26
CCNK-209ENST00000557441 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
CCNK-209ENST00000557441 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
CCNK-209ENST00000557441 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
CCNK-209ENST00000557441 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
CCNK-209ENST00000557441 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
CCNK-209ENST00000557441 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
CCNK-209ENST00000557441 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
CCNK-209ENST00000557441 TRHP20396 242 aaPredicted RBP22.76■■□□□ 1.23
CCNK-209ENST00000557441 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
CCNK-209ENST00000557441 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
CCNK-209ENST00000557441 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
CCNK-209ENST00000557441 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
CCNK-209ENST00000557441 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.22
CCNK-209ENST00000557441 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
CCNK-209ENST00000557441 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
CCNK-209ENST00000557441 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
CCNK-209ENST00000557441 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
CCNK-209ENST00000557441 NUP160Q12769 1436 aa22.55■■□□□ 1.2
CCNK-209ENST00000557441 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
CCNK-209ENST00000557441 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms